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Information for unigene UN70225
| FASTA Sequence |
| Unigene ID: UN70225 | Length: 796 |
SSR | | GCCAACCAAGCTAGGAAAAGCAAATAAAGAAGGCCGCGAGGATTAAACGTGCACCGAATCTCTCTCTCTCTCCAACCAAATTCCTG
ATCGATTCCGCCATCGCGTAAACCAGTTCCGGCGTAGTGCTCTGTTCGTTTTGTTCTTCGGAAAGATACGATTTGATGATTTCTAG
GTGAAAGAAAGAAAGAAAGAAAGTAAGAGTGTCTCCTCCGGCGATTTCGACATGGAATCCGTATATTCCAGCGGCGGCGTAGAACC
GTCGATCGCGGCATGGCATTTCCAGATTGCTGTCTATTTCGCCTTCGGATTCTTCTTTTTGAGGCTCTTCCTCGTTAGATTCGTCT
TTCAAAGGATAGCTGTATGGCTTTTGACTACTGGTTCTACGCCAATTAAAGTGAAGGATGCTGCTACTCGTGCAAAGCTCATCAAA
TGCAAGGAGTCCCTCTGGAAACTGCTCTACTTTGGTGCTTGTGAGATTTTCGTCCTCAATGCCCTTTATCACGAGCCTTGGGCCGC
AGATATTAAACTCTTCCTTCGCGGTTGGCCTAACCAAGACCTCAAGCTTCCTATAAAGCTTTACTATATGTGCCAGTGCGGTTTCT
ATGTCTATGGTGTTGCTGCCTTGCTTGCGTGGGAGACCAGAAGAAAGGATTTTGCTGTTATGATGTCTCACCATGTCATCACTATC
ATCCTCATTACCTACTCATACCTTACCAGTTTTTCCAGATTGGAGCTATCATCCTAGCCCTTCATGATGCAAGTGACGTTTTATGG
AACTGCTAAAATTTCAGTACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188557 LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] | 742 | 2e-076 |
| AAF66103 LAG1 homolog 2 [Arabidopsis thaliana] | 742 | 2e-076 |
| XP_002885303 hypothetical protein ARALYDRAFT_318682 [Arabidopsis lyrata subsp. lyrata] | 702 | 7e-072 |
| CBI32408 unnamed protein product [Vitis vinifera] | 531 | 4e-052 |
| XP_002518765 longevity assurance factor, putative [Ricinus communis] | 516 | 2e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJK3 LAG1 longevity assurance homolog 2 | 742 | 7e-078 |
| Q84QC0 ASC1-like protein 3 | 410 | 2e-039 |
| Q6NQI8 LAG1 longevity assurance homolog 3 | 321 | 5e-029 |
| Q9M6A3 Protein ASC1 | 306 | 2e-027 |
| Q6EUN0 ASC1-like protein 1 | 295 | 5e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RYI1 Longevity assurance factor, putative | 516 | 2e-050 |
| B9N4Y1 Predicted protein | 487 | 4e-047 |
| A9NUL2 Putative uncharacterized protein | 437 | 2e-041 |
| A2XET9 Putative uncharacterized protein | 410 | 3e-038 |
| Q10NP1 Longevity-assurance protein containing protein, expressed | 410 | 3e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19260.1 LOH2 (LAG ONE HOMOLOGUE 2) | 742 | 6e-079 |
| AT1G13580.1 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 321 | 4e-030 |
| AT1G13580.2 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 321 | 4e-030 |
| AT1G26200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) (TAIR:AT1G13580.2). | 283 | 1e-025 |
| AT3G25540.1 LAG1 | 283 | 1e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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