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Information for unigene UN70250

FASTA Sequence
Unigene ID: UN70250Length: 727 SSR 
GGAAGTCACCGAGAGACACAGAAGAAAGAGAGAAGAGAAGAGAGAGAGTTTTAAGCTTCTGGGCTTTTTGCTTTGATTTGCTTGCG
TCTTGATCTCTCTCTCTCTCTCTCATCAATCTTCTGATCATCTCTTCATCATTGTTTTTTTTTTCTTTCCTTTCTTTGTTTCAGAG
GGATGTTTCTATTTATAGTTTTGTGCTGAGAGAGATTCTTCTATAGATTTATTAATGATTCTCGTTCATTGTCAACGTCTTCTTCC
TCTTTGTAATCATCATGTTTTTTTTTTTTGATATCGACACGTGAAGTTGTGTAGATTTATATTATCTCCATCCTTCAAGCTCAGAT
CTGATTTGATCTCGCTCTAAGTCAAATCTTGAATTAGGGTTCTTGCTGCTATAGATAAGATATGAACTACTTCCCCGATGAAGTGA
TAGAGCACGTCTTCGACTTCGTCACATCTCATAAAGACAGGAACTCGATATCTCTGGTTTGCAAATCTTGGTTCAAGATCGAGAGA
TACAGCAGACAGACCGTGTTCATCGGCAACTGTTACTCGACAAACCCGGAGAGGTTACTAAGGAGGTTTCCTTGTTTCAAGTCCTT
AACCTTGAAAGGGAAGCCTCACTTCGCTGACTTCAACTTGGTTCCTCACGGATGGGGAGGCTTCGTGCAGCCTTGGATCGAGGCTT
TAGCGAGAAGCCGCGTGGGGTTGGAGGAGCTGAGGTGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566800 protein auxin SIGNALING F-BOX 2 [Arabidopsis thaliana]5403e-053
XP_002875343 auxin signaling F-box 2 [Arabidopsis lyrata subsp. lyrata]5361e-052
NP_563915 auxin signaling F-box 3 protein [Arabidopsis thaliana]5261e-051
XP_002892715 auxin signaling F-box 3 [Arabidopsis lyrata subsp. lyrata]5181e-050
XP_002892706 predicted protein [Arabidopsis lyrata subsp. lyrata]5153e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9LW29 Protein AUXIN SIGNALING F-BOX 25402e-054
Q9LPW7 Protein AUXIN SIGNALING F-BOX 35267e-053
Q570C0 Protein TRANSPORT INHIBITOR RESPONSE 13913e-037
Q7XVM8 Transport inhibitor response 1-like protein Os04g03956003781e-035
Q9ZR12 GRR1-like protein 13743e-035

TrEMBL top hits (Blast detail)Scoree value
A5JVC9 Putative uncharacterized protein4929e-048
A5JVD6 Putative uncharacterized protein4901e-047
B8Y9B4 Transport inhibitor response protein4758e-046
B9RH07 TRANSPORT INHIBITOR RESPONSE 1 protein, putative4703e-045
B9GFH2 F-box family protein4561e-043

Arabidopsis top hits (Blast detail)Scoree value
AT3G26810.1 AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase5401e-055
AT1G12820.1 AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase5266e-054
AT3G62980.1 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase3913e-038
AT4G03190.1 GRH1 (GRR1-LIKE PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase3743e-036
AT4G24390.2 F-box family protein (FBX14)2963e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

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