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Information for unigene UN70290
| FASTA Sequence |
| Unigene ID: UN70290 | Length: 585 |
SSR | | GGACGAAGGAAGAAGAGAATCAATCTCACACGAAATTACACAACAATAATAATAGTTAGTTATTTAAAAGATTTTATAAATAAAAA
CTCCAAAGCTTCTCTGTAACTACTACTCTCGTCTTCAATGTTAATCATTTAGATCTTGAGAGAGAGAGAAACAAAAATCAAAAATC
AAAAATCATGGCGGCGAAATCGAAGAGCAACCTTCGTTACCAACCGCGAAAATCAGCATCGCGATCGACACAAGCGTTCACGGTGC
TGATCGGTCTGCTGGTGGTGCTTATGATACTTCTGGGTCTGGGGATCTTATCACTCCCCAATGCCAACAGAAACTCATCCAAGCCC
AACGATTTGACCAACATTGTACGGAAGAGCCAGGATGAGAGCTATGGAGGAGAGGAGGAAGGGAACGGAGAGCGTTGGGTTGAAGT
GATATCGTGGGAGCCTAGAGCTGTTGTTTACCACAATTTCTTGACCAATGACGAATGTTAGCACCTCATCAGCCTCGCTAAACCCA
ACATGGTTAAGTCAACTGTGGTCGATGAGAAAACCGGTGGCAGCAAAGATAGCAGAGTAAGGACTAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179363 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 583 | 2e-058 |
| AAM65040 putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana] | 583 | 2e-058 |
| XP_002884079 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 569 | 9e-057 |
| XP_002869059 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 456 | 1e-043 |
| NP_195306 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 431 | 9e-041 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q24JN5 At2g17720 | 583 | 1e-058 |
| Q8LB05 Putative prolyl 4-hydroxylase, alpha subunit | 583 | 1e-058 |
| Q9SZS9 Putative uncharacterized protein AT4g35810 | 414 | 6e-039 |
| Q9FKX6 Prolyl 4-hydroxylase, alpha subunit-like protein | 375 | 2e-034 |
| B9SXB7 Prolyl 4-hydroxylase alpha subunit, putative | 349 | 2e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G17720.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 583 | 1e-060 |
| AT4G35810.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 431 | 4e-043 |
| AT5G66060.1 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 375 | 1e-036 |
| AT1G20270.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 301 | 5e-028 |
| AT2G43080.1 AT-P4H-1 (A. THALIANA P4H ISOFORM 1); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen | 143 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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