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Information for unigene UN70309

FASTA Sequence
Unigene ID: UN70309Length: 733 SSR 
GGGTTTCACTCCACAAGACGCCGAAACCAAAACGATAAGAGAGAGAGAGAGAGATATGATCTGCGTTAGAGCTCGGCCGCTATTTT
CTTCACCGTTATCTCTCGCGTTCTCACCAACCAAACACTCCCCCTCTACCCACCTCCGTCTCCCTCTCTCCTCCTCCTCCTCACGA
CGCTCTCTCTCCGCCCTCGCAATGTCTTCCTCCTCCTCCTCCACTCCTCCTCCCGAGATCATCGAGCACATCGTCCTCTTCAAAGT
CAAACCCGAAACCGACTCCTCCAAGATCGCCTCCATGATGAACGGCCTCAACGCCCTCGCCTCCCTCACCCAAGTCATCCACATCT
CCGCCGCCCCTCTCCACCGCGTCAGATCCTCCCCCACCGCCTTCACCCACGTCCTCCACAGCCGGTACGTCTCCAAGGAGGATCTC
ACCGCCTACGCCGCGCATCCCGACCACGTCCGCGTCGTCAAGGAGTCGGTTCTACCGATCTGCGAGGAGGTCATGGCCGTCGACTG
GGTCGCGGATCGTGTCCCCGGAACCCTGGCTCCGCCTCCCGGCTCCGCCGCGAAGCTCATTTTCCTCAAGCTGAAGGAGGATGATG
GTGGTGCCAAGTCGGAGATTGTGGGTGTGATCAAGGGGCTTAGCGAGAAGCTTCCGGGATTGGTCAGATCACTGTCGGAGAGAACT
TCTCTCCGGCGAGAGCGAGAGGCTTCTCGGTTGCGTCGATTGCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881187 hypothetical protein ARALYDRAFT_482092 [Arabidopsis lyrata subsp. lyrata]6122e-061
NP_180725 Stress responsive alpha-beta barrel domain protein [Arabidopsis thaliana]6041e-060
BAF00446 hypothetical protein [Arabidopsis thaliana]5762e-057
XP_002279848 PREDICTED: hypothetical protein [Vitis vinifera]4831e-046
XP_002514060 conserved hypothetical protein [Ricinus communis]4581e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPQ6 Vegetative cell wall protein gp11942e-014
Q6BSP4 Branchpoint-bridging protein1871e-013
Q9LVN1 Formin-like protein 131834e-013
Q0GNC1 Inverted formin-21711e-011
O48809 Leucine-rich repeat extensin-like protein 21682e-011

TrEMBL top hits (Blast detail)Scoree value
Q9SIP1 At2g316706049e-061
Q0WR03 Putative uncharacterized protein At2g316705762e-057
B9RK16 Putative uncharacterized protein4588e-044
A5AMX3 Putative uncharacterized protein4506e-043
B9N546 Predicted protein4506e-043

Arabidopsis top hits (Blast detail)Scoree value
AT2G31670.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: DABB1 (DIMERIC A/B BARREL DOMAINS-PROTEIN 1) (TAIR:AT1G51360.1); Has 138 Blast hits to 135 proteins in 38 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 4; Plants - 74; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).6046e-063
AT1G51360.1 DABB1 (DIMERIC A/B BARREL DOMAINS-PROTEIN 1)3644e-035
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein1897e-015
AT5G58160.1 actin binding1834e-014
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1744e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members