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Information for unigene UN70406
| FASTA Sequence |
| Unigene ID: UN70406 | Length: 689 |
SSR | | GTGCTGTGACTGTGCTTGCGTGTGCATAGGTCATTTACTTATTCAAATATCTGCCTCGCAGGGGAGATGTTGTCGAAGTGGATACA
TGGGTTAGTCAGTCTGGAAAGAATGGTATGCGTCGTGATTGGCTGGTTCGGGATTGCAATACTGGAGAAATTGTAACACGAGCATC
AAGGTCAGACCTCTTATATTTTGTTTACTCCAGCTATTATCATTTTCTGCATGTGATGATTTGTTGGTCTTTTGCTCTCTGTTTGT
ATCGTTTGCTCCGCCATTAAACTCTCATGAGTAGTATATGCATTTTGGGTTTAGAAATTTGATAATAGACACTTCATATGTATGGC
AATTTTCTTCATTTTGCAGTTTGTGGGTGATGATGAATAAACTCACGAGGAGGTTGTCAAAGATTCCTGAAGAGGTTCGCGGGGAA
ATAGAGCCTTATTTTGTGAACTCTGATCCTGTCATTGCTGAAGACAGCAGAAAGTTAACCAAACTTGATGACAAGACTGCTGACTA
TGTTCGTTCTGGTCTCACTGTGAGTGAAGAACATATATATATATATATATACTGCTCCATTTTCCTGTTGCTGGCTGTGACTATCT
CCATTGTCATGATTTTCATTTAATTGGCATTTGCTTAGACTTACAACATTTGAAGTCCATGTCTTTTTGTTCACGTTTTATTAAAA
A
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892461 fatty acyl-acp thioesterases B [Arabidopsis lyrata subsp. lyrata] | 290 | 3e-024 |
| CAA85388 acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana] | 288 | 5e-024 |
| CAA85387 acyl-(acyl carrier protein) thioesterase [Arabidopsis thaliana] | 288 | 5e-024 |
| NP_172327 fatty acyl-ACP thioesterases B [Arabidopsis thaliana] | 288 | 5e-024 |
| ACR56793 stearoyl ACP thioesterase [Brassica juncea] | 285 | 1e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9SQI3 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 248 | 1e-020 |
| Q39513 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 220 | 2e-017 |
| Q39473 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 169 | 1e-011 |
| Q41635 Lauroyl-acyl carrier protein thioesterase, chloroplastic | 161 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q42558 Acyl-(Acyl carrier protein) thioesterase | 288 | 3e-024 |
| Q42562 Acyl-(Acyl carrier protein) thioesterase | 288 | 3e-024 |
| Q9SJE2 At1g08510 | 288 | 3e-024 |
| D6BND4 Stearoyl ACP thioesterase | 285 | 8e-024 |
| D6BND5 Stearoyl ACP thioesterase | 285 | 8e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G08510.1 FATB (fatty acyl-ACP thioesterases B); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | 288 | 2e-026 |
| AT4G13050.1 acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative | 134 | 2e-008 |
| AT3G25110.1 AtFaTA (Arabidopsis FatA acyl-ACP thioesterase); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | 126 | 1e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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