Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN70431

FASTA Sequence
Unigene ID: UN70431Length: 726 SSR 
GGACACCATTTCTCTCTCTCTCTCTCACACACTACAATCTCTAAACGGCTTACATTTCATCCTGTCAATGGTCAGAAGACTTAGCT
TTCGAATTTAGCCGAGAGCATGTCTTCTTGTCTTCTTCCTAACTTCAAGTGCCAACCTGATTCTTTCTCTATTCATTTCAGAACCT
CCTACTCTATCTCAAAACACAATAAGAGTTCTGTCTACTTCCAACCGCAATGCGCAGTATCCACTCCACCTGCACCTAAATGTAAC
AAAGAGTCGTCTGAAACACTTCTAACAAGCGATGAAGCAGTTGTTGCGGCAGCAGCAGCTGAAGCACTCGCCCTTGCCAGAGCTGC
TCTCAAAGTGGCCAAAGATGCCACTTTATTCAAAAACACTCACAACTCGAAACTATCAGTATCATCAACACCCGACAAACGCTCCA
AGTGGGACCAGTTTACCGAGAAGGAGCGTGCTGGCATATTGGGGCATCTACCGGTTTCGGACACTGGAGTTGTGAGTGATAGAGTC
ACTCCACCTGCACGTCAGACCGAAAGGAAAGCTCGGAGGGTTAAAGGGCTAGAGAAAACTGCATCAGGCATGCAGTCTGTGAAGAC
TGGTTCGAGCTCTAGAAAGAAACGTGTTGCTTCACAGGAGATTGACCATAATGATCCTTTGCGTTATCTGAGGATGACAACAAGCA
GTTCAAAGCTTCTCACTGCTAGAGAGACAACAGCTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB83106 sigma factor 2 [Sinapis alba]3763e-034
XP_002889701 hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]3674e-033
NP_172330 RNApolymerase sigma subunit 2 [Arabidopsis thaliana]3567e-032
AAB69385 sigma factor 2 [Arabidopsis thaliana]3567e-032
BAC43527 putative plastid RNA polymerase sigma-subunit SIG1 [Arabidopsis thaliana]3495e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9MTH3 Sigma factor 23762e-034
O22056 At1g085403565e-032
O22455 Sigma factor 23565e-032
Q8GWC1 Putative plastid RNA polymerase sigma-subunit SIG13493e-031
B9SDA3 RNA polymerase sigma factor rpoD1, putative2033e-014

Arabidopsis top hits (Blast detail)Scoree value
AT1G08540.1 SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor3563e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members