RadishBase

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Information for unigene UN70497

FASTA Sequence

Unigene ID: UN70497	Length: 673	SSR
CGGGGGGGGCTCCTCCTCTGTTCTTTTCTCTCTCTCTCTCTCAACAACCGTTTCTGCTTCTCAGTTCCCAAAGTCGCCAAGCAGGA CATCGCTGAATTTTCTTGTTCCAGACATGGCAGCAGTAATGGAAGACACAACATTTACAAAGGTGTTCGTTGGAGGGTTAGCATGG GAAACCCACAAAGTCTCTCTAAGGAACTACTTCGAACAGTTTGGGGACATTGTTGAAGCTGTCGTGATCACTGATAAGTCCAGCGG CAGATCCAAAGGCTACGGCTTTGTGACTTTTTGTGATCCAGAAGCAGCTCAGAAGGCATGCATAGATCCAGCTCCTGTCATTGATG GGAGAAGAGCAAATTGCAATCTTGCAGCTTTTGGTGTTCAGAGATCTACTTCTCCAGTTCACGGACACGTAGGAGGCAGAGGTGTG AAGGTCACAAGCCCTTTCAAGACACACTTTGGGACTGCAGCTGCTCTTCCTTCCCCAATTTCATTCTCTCACTACACACTTCCTTA CACTAATCCTTTTGGGTTCTCTCCGTACTCGATGGATTACAACTATCCCACGAGCTACTACAATGTTTATGGAGGGGCAACTGCTC AGCATCCGATGTATAGCACCGGACCAATGACTGGTGTGGCAGCAGCGTACTACCCATATCTCCAGTTTGCT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_973958 RNA recognition motif-containing protein [Arabidopsis thaliana]	887	2e-093
NP_174613 RNA recognition motif-containing protein [Arabidopsis thaliana]	875	4e-092
XP_002891043 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]	853	1e-089
XP_002510776 RNA-binding region-containing protein, putative [Ricinus communis]	635	3e-064
CAN73746 hypothetical protein VITISV_041364 [Vitis vinifera]	589	6e-059

Swiss-Prot top hits (Blast detail)	Score	e value
Q6DIV4 RNA-binding protein 38	322	3e-029
Q7T3I7 RNA-binding protein 38	320	4e-029
Q62176 RNA-binding protein 38	316	1e-028
Q9H0Z9 RNA-binding protein 38	314	2e-028
Q5ZMA3 RNA-binding protein 24	313	3e-028

TrEMBL top hits (Blast detail)	Score	e value
Q94BU4 At1g33470/F10C21_14	887	1e-093
Q67YS0 Putative uncharacterized protein At1g33470	875	3e-092
B9R8Y3 RNA-binding region-containing protein, putative	635	2e-064
A5ASV2 Putative uncharacterized protein (Fragment)	589	4e-059
B9I875 Predicted protein	567	1e-056

Arabidopsis top hits (Blast detail)	Score	e value
AT1G33470.2 RNA recognition motif (RRM)-containing protein	900	2e-097
AT1G33470.1 RNA recognition motif (RRM)-containing protein	884	2e-095
AT1G22910.2 RNA recognition motif (RRM)-containing protein	462	1e-046
AT1G22910.1 RNA recognition motif (RRM)-containing protein	462	1e-046
AT1G22910.3 RNA recognition motif (RRM)-containing protein	462	1e-046

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	1			100%

Unigene Members