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Information for unigene UN70526
| FASTA Sequence |
| Unigene ID: UN70526 | Length: 654 |
SSR | | GGAAAGTCGAAAACCTTATCTCCTCTCTTCTCTTCTCTTCTCTTCTCATCTCTTCTCTTCTCATTCACAATGGCAGCTTCAGCTTC
GTCTCTCGCTCTCACCACCTTCAACCCTAACTCCCTTCCTTTCTCTGTCTCCAAACCCTCCTCCTCCCTCTTACCTCCTTCCCTCT
CTTTCAAACTCAACTCCGTCTTCTCTTCATCCTCCTCCGCCAAATGCAACTCTCCCGCCTCTCGCTTCCTCCGTAACGTCGCCGTC
ACGGAAGACTTCTCTGTCGAAGAAGAGGACGGCGGTTTCGCCGATGACGTGGCGCCGCCGCCACAGGAGCAGTCCTTCTCTGCTGA
CCTCAAGCTTTTCGTCGGTAACCTTCCGTTCGACGTTGACAGTGCTCAGCTCGCTCAGCTCTTCGAGAGCGCAGGGAACGTTGAGA
TGGTTGAGGTGATCTATGACAAGGTGACAGGACGAAGCAGAGGTTTCGGGTTCGTGACAATGTCTTCTGTCTCCGAAGTGGAGGCT
GCTGCTCAGCAGTTTAATGGCTATGAGTTGGATGGTAGACAGTTGAGAGTTAACGCAGGTCCTCCTCCACCAAAGAGGGAAGACTC
CTTCTCCAGAGGACCCAGAAGCAGCTTTGGAGGTGGTGGTGGTGGTGGTGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881497 hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata] | 763 | 4e-079 |
| AAM66970 putative RNA-binding protein [Arabidopsis thaliana] | 755 | 3e-078 |
| NP_181259 ribonucleoprotein [Arabidopsis thaliana] | 753 | 5e-078 |
| BAA06518 RNA-binding protein cp29 [Arabidopsis thaliana] | 659 | 4e-067 |
| NP_190914 chloroplast RNA-binding protein 29 [Arabidopsis thaliana] | 659 | 4e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic | 753 | 3e-079 |
| Q43349 29 kDa ribonucleoprotein, chloroplastic | 659 | 2e-068 |
| Q08935 29 kDa ribonucleoprotein A, chloroplastic | 460 | 2e-045 |
| P49313 30 kDa ribonucleoprotein, chloroplastic | 442 | 3e-043 |
| Q08937 29 kDa ribonucleoprotein B, chloroplastic | 428 | 1e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L941 Putative RNA-binding protein | 755 | 2e-078 |
| Q7GA50 Putative RNA-binding protein | 753 | 4e-078 |
| B9S0K6 Ribonucleoprotein, chloroplast, putative | 540 | 2e-053 |
| Q8W214 Single-stranded DNA binding protein | 497 | 2e-048 |
| B9IFN7 Predicted protein | 492 | 7e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37220.1 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | 753 | 2e-080 |
| AT3G53460.1 CP29; RNA binding / poly(U) binding | 659 | 2e-069 |
| AT3G53460.2 CP29; RNA binding / poly(U) binding | 659 | 2e-069 |
| AT5G50250.1 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative | 288 | 2e-026 |
| AT4G24770.1 RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding | 256 | 1e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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