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Information for unigene UN70588
| FASTA Sequence |
| Unigene ID: UN70588 | Length: 681 |
SSR | | TTTTTTTGTTTTCTCCGAAGTCAGTGAGAGAGAGAGAGAAGAAGAAGAAAGTTTGAGTTCCGATGAGTTCTGGAGGAGGAGGGGGA
ATCGTGGCTGGACCAACAGCTGCATCAGCAGCTCCTTCAAGCGGCGGTGGAAACGTGGAGTGGCACGTCAGACCACCTAACCCTAT
AAACCCAGCTGTCTTCTTCGACGTCTCTATTGGTGGTATCCCCGCCGGTCGTATCAAGATGGAGCTTTTCGCTGACATTGCCCCCA
AAACTGCTGAAAACTTCAGGCAGTTCTGTACTGGTGAACTCAGAAAGGCTGGGAAGCCTCTTGGTTACAAAGAATGTCAGTTTCAC
AGAGTCATCAAGGATTTTATGATTCAAAGTGGTGATTTTCTTAAGAATGATGGGAGTGGATGCATGTCAATCTATGGCCACCAGTT
CCATGATGAGAATTTTACTGCCAAACATACTGGTCCTGGACTGCTCTCCATGGCAAATAGTGGGCCAGACACTAATGGTTGCCAGT
TCTTCATCAGCTGTGCAAAATGCGACTGGCTTGACAACAAGCATGTTGTCTTTGGGAGAGTGCTGGGAGATGGGTTATTGGTGGTG
CGGAAGATTGAGAACGTGGCTGTTGGACCAAACAACCGTCCTAAGCTTGCTGTTGTTATTACAGAGTGTGGGGAGATGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181407 peptidyl-prolyl isomerase H (cyclophilin H) [Arabidopsis thaliana] | 1002 | 8e-107 |
| XP_002881613 hypothetical protein ARALYDRAFT_482885 [Arabidopsis lyrata subsp. lyrata] | 991 | 1e-105 |
| XP_002513025 peptidyl-prolyl cis-trans isomerase h, ppih, putative [Ricinus communis] | 893 | 3e-094 |
| XP_002304808 predicted protein [Populus trichocarpa] | 888 | 1e-093 |
| ACJ83867 unknown [Medicago truncatula] | 875 | 4e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0P5D0 Peptidyl-prolyl cis-trans isomerase H | 680 | 8e-071 |
| O43447 Peptidyl-prolyl cis-trans isomerase H | 680 | 8e-071 |
| P0C1I3 Peptidyl-prolyl cis-trans isomerase H | 658 | 3e-068 |
| P52018 Peptidyl-prolyl cis-trans isomerase 11 | 649 | 3e-067 |
| Q5KA96 Peptidyl-prolyl cis-trans isomerase H | 623 | 3e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVJ4 At2g38730 | 1002 | 5e-107 |
| B9RG73 Peptidyl-prolyl cis-trans isomerase | 893 | 2e-094 |
| B9GX77 Peptidyl-prolyl cis-trans isomerase | 888 | 9e-094 |
| B7FGI8 Peptidyl-prolyl cis-trans isomerase | 875 | 3e-092 |
| C6SVG5 Peptidyl-prolyl cis-trans isomerase | 874 | 4e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38730.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 1002 | 4e-109 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 507 | 9e-052 |
| AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase | 504 | 2e-051 |
| AT3G56070.2 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase | 504 | 2e-051 |
| AT3G62030.1 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) | 495 | 2e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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