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Information for unigene UN70646

FASTA Sequence
Unigene ID: UN70646Length: 789 SSR 
GGGAGACACAGAAGAAAGAGAGAAGAGAGAGAGAGTTTTAAGTTTCTGGGCTTTTGCTTTGATTTGCTTGCGTCTTGATCTCTCTC
TCTTTCTCTCTCATCGATCTTCTGATCATCTCTTCATCATTGTTTTTTTTTCTTTCCTTTCTTTGTTTCAGAGGGAAGTTTCTATT
TATAGTTTTGTGCTGAGAGAGATTCTTCTATAGATGTATTAATGATTCTCGTTCATTGTCAACGTCTTCTCCCTCTTTGTAATCAT
CATGTTTTTTTTTTTTGATATCGACACGTGAAGTTGTGTAGATTTATATTCTCTCCATCCTTCGAGCTCAGATATGATTTGATCTC
CCTCTAAGTCAAATCTTGAATTAGGGTTCTCACTGCTATTAGAGAAGATATGAACTACTTCCCAGATGAAGTGATAGAGCACGTCT
TCGACTTCGTTACATCTCATAAAGACAGGAACTCGATATCTCTGGTTTGCAAATCTTGGTTCAAGATCGAGAGATATAGCAGACAG
AACGTGTTCATCGGCAACTGTTACTCGATAATCCCGGAGAGGTTACTAAGGAGGTTTCCTTGTTTCAAGTCCTTAACCTTGAAAGG
GAAGCCTCACTTCGCTGACTTCAACTTGGTTCCTCACGGATGGGGAGGTTTCGTGCAGCCTTGGATCGAGGCTTTAGCGAGAAGCC
GCGTGGGGCTAGAGGAGCTGAGTTGAAGCGGATGGTTGTGACTGATGAGAGCTTGGAGCTGCTTTCGCGCTCTTTGTGATTTAAGT
CTTTGGTGCTTGTTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566800 protein auxin SIGNALING F-BOX 2 [Arabidopsis thaliana]5323e-052
XP_002875343 auxin signaling F-box 2 [Arabidopsis lyrata subsp. lyrata]5281e-051
NP_563915 auxin signaling F-box 3 protein [Arabidopsis thaliana]5181e-050
XP_002892715 auxin signaling F-box 3 [Arabidopsis lyrata subsp. lyrata]5153e-050
XP_002892706 predicted protein [Arabidopsis lyrata subsp. lyrata]5127e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9LW29 Protein AUXIN SIGNALING F-BOX 25322e-053
Q9LPW7 Protein AUXIN SIGNALING F-BOX 35186e-052
Q570C0 Protein TRANSPORT INHIBITOR RESPONSE 13871e-036
Q7XVM8 Transport inhibitor response 1-like protein Os04g03956003752e-035
Q9ZR12 GRR1-like protein 13709e-035

TrEMBL top hits (Blast detail)Scoree value
A5JVC9 Putative uncharacterized protein4902e-047
A5JVD6 Putative uncharacterized protein4883e-047
B8Y9B4 Transport inhibitor response protein4722e-045
B9RH07 TRANSPORT INHIBITOR RESPONSE 1 protein, putative4686e-045
B9GFH2 F-box family protein4571e-043

Arabidopsis top hits (Blast detail)Scoree value
AT3G26810.1 AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase5321e-054
AT1G12820.1 AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase5186e-053
AT3G62980.1 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase3879e-038
AT4G03190.1 GRH1 (GRR1-LIKE PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase3709e-036
AT4G24390.2 F-box family protein (FBX14)2973e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

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