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Information for unigene UN70670

FASTA Sequence
Unigene ID: UN70670Length: 780 SSR 
GGGGTGTTCTTCGATCCTCTCTCTCTCTACAAACCTAAAATCTCGGGCCATTTCGATCTCAGAGAGTAACGAGAAAGAGAGGATTC
GCGATGACGATCACAAAAACGGTTTTGGAATCGAAGACGGACAAATGCTATGCTCCGAGTTTCGTCGCCATCAATATCTGTCTTGC
TTTAATCGACGGCGCTCTCGCTCTCATCGCATTTCTTCAGTTAAATCGGTTTCACAGGAGGGATAAACGAGTTGGATGGACACGGC
AGAAAGTTCTTCATCTTATGATTGGCTCCTCAAACACTGGCTCGCTTCTTTATTTTGTGGCTGCGATAATAGCAACTTGCACGAGG
TGGCATCATTGGTCCAACGCGTTCGGTTTTCTGCTAATGGCCTTTCCCAAAATTCTCTTTCTTGCAACTTTTCTGCTACTTCTCTC
TTTCTGATGTTTGCCATCAGGGAAATGGAGAGGATGATGATGATGAAGAAAATAGCATCCAGCAAATGTTGCTCGAGAAAAGCAAG
AGCAAATCAGGTTCTTCCAGTGCAAGTGATCGCAGAAAGTGTTGCTCTTTCCATGGGATTCATGTCGGCACCCGTCAGAAGTTTGT
TGTTGCAGCGGTTATTCTTGTGTTCATCTTAATGATATCATTTGCAATCCTTATCTGGATTGCTTCCGGAGATAATTCTGCAGATC
CTTCCTTATTGGCTGGGGTGTATGTAGATATTTTTGCTTCATAATCCTAATCACCGGAGGAGGACTATGCTTCTATGGCATGCGTC
TGCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850719 uncharacterized protein [Arabidopsis thaliana]5082e-049
NP_567077 uncharacterized protein [Arabidopsis thaliana]5082e-049
XP_002876488 hypothetical protein ARALYDRAFT_486377 [Arabidopsis lyrata subsp. lyrata]4983e-048
NP_001030892 uncharacterized protein [Arabidopsis thaliana]4429e-042
CAB86937 putative protein [Arabidopsis thaliana]4429e-042

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EAH7 AT3G59090 protein5081e-049
Q945Q2 AT3g59090/F17J16_1405081e-049
Q2V3N2 AT3G59090 protein4426e-042
Q9LYS7 Putative uncharacterized protein F17J16_1404426e-042
B9H827 Predicted protein3387e-030

Arabidopsis top hits (Blast detail)Scoree value
AT3G59090.1 EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).5088e-052
AT3G59090.2 EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).5088e-052
AT3G59090.3 LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).4424e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members