Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN70780

FASTA Sequence
Unigene ID: UN70780Length: 741 SSR 
GGAAGTATGGAAGAGATTCAGAGTGCTGAAGGATCTGTTGATGTTTTGATGGGCATTCTTGGAGCACTTGATCCCGCTCATCCTGA
TGTAAGAGTTTTGCTTATTGCTATGTTTCTTACAAGGGAACTGATAGTTTGTGTTTGAATAAGTAATGGAAACTAAATTGTTGTTG
TAGGGTTTGAAAGAAGAGCTGATAGTTGATTTAGTTGAGCAATGTCGTACTTATCAAAAACGTGTTATGACTCTTGTCAACACCAC
AACGTGAGTTTTATTCTTCTTCTTCCTCTTCCTCTTCTTGCTTCGTGAATGTTACCTCTCATTTTGATGATATGGTTATTCGTTTT
TACTTTATTCAGAGACGAGGAGCTTCTGTGCCAGGGATTGGCATTGAACGATAACTTGCAGCGTGTTCTTCAGCGTCACGACGATA
TTGCCTCTGTTCCTTCAAATGAAAGCAGCACAACTCCTCCTCCTCCTCCTCCAGCTCAGCTAGTCAGCATCAATCATGATGATGAC
CAAGACGATGAATCAGATGATGATTTTGCTCAGCTATCTCACAGGTAAGATTAGTATTCCTATTTTGAGAGATTGACATTTTTTTT
AAAAACCATCTATTCATTTCTTTACAAGGTCTAAAAGAGATTCCAGCCCTATTCTTCCCCCACCACCACCACCTCCAGTACATGGT
ACTACTGAGTCAAGTATGGTGGATTTCCTTAGTGGTGATGTCTATAAACCTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC00635 Unknown protein [Arabidopsis thaliana]2447e-019
NP_177823 Target of Myb protein 1 [Arabidopsis thaliana]2447e-019
XP_002889114 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]2375e-018
NP_564138 Target of Myb protein 1 [Arabidopsis thaliana]2213e-016
XP_002893160 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]2152e-015

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O49283 F22K20.7 protein2445e-019
Q6NQK0 At1g769702445e-019
Q9LPL6 F24J8.3 protein2212e-016
B9S2Q1 Protein transporter, putative1943e-013
B9H7L0 Predicted protein1721e-010

Arabidopsis top hits (Blast detail)Scoree value
AT1G76970.1 VHS domain-containing protein / GAT domain-containing protein2443e-021
AT1G21380.1 VHS domain-containing protein / GAT domain-containing protein2211e-018
AT3G08790.1 VHS domain-containing protein / GAT domain-containing protein1126e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members