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Information for unigene UN70819

FASTA Sequence
Unigene ID: UN70819Length: 750 SSR 
GGATTGTTGTGTTGTGTTGGGGTCAATACCACAAAAAAGAGTAACGATGATGACGATTCCATCTTAGCTTTTTCTGTTTTATCTTC
ACAAAGGAGTTTACTTTCTTTCTCTCTCTCTCTCTCTCTGACTCAATCCGATCTCGCATCCTCCTTCAAGTTTCAATCTTGTGGGT
AAAGTAAAGGACTTTCTGTTGTTAGGGGTTTCAAAGTTCATACCTTTAAGAGAAGATCACTATTTGGAGATGAGGGTCAATGGTAG
ATTCCTGGATTAACGTGTTAGCGATGGAGAATCACCACCCTTCGACTCTCTTATCGATGGATTCAAGCGCTTCCTCACACGAGGAG
CTCGATTTGGAGATGAACAACAACAACAACAACAACAACCGCCAATCTCTCATCCTCTCCGGTCCTCCCGACATCAACCTACCTCT
CTCCGCCGAGCGAAGCCCTCCTCCTCAGCCTTGGAACCTCGATTCCTGCGACATTCTCGATGTCGGGTTAGGCTCCCAAGCCTACG
AGACCGAGAATTACATGAGCGTTGTCCCCAAAGTCGGTCGGAAATGCGCTAAGCGTGTCGACAGCGTCTGGGGAGCTTGGGTCTTC
TTCAGTTTCTACTTCAAACCCGCTTTGAACGACAAGTCGAAAGCCAAGATCGCCAGAGACAGCAACGGGCTGTCTGGTTCCGACAA
ACGGATCTCAAGCTCGATGTGTTTTAGTCCAGCACGATATGGAGATATGTACATGTGGGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34598 unnamed protein product [Thellungiella halophila]6882e-070
XP_002881516 sodium-and lithium-tolerant 1 [Arabidopsis lyrata subsp. lyrata]6202e-062
NP_565864 protein sodium-and lithium-tolerant 1 [Arabidopsis thaliana]6022e-060
XP_002527735 conserved hypothetical protein [Ricinus communis]5583e-055
XP_002263786 PREDICTED: hypothetical protein [Vitis vinifera]5484e-054

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O80926 Expressed protein6022e-060
B9SP16 Putative uncharacterized protein5708e-057
Q9FQY3 SLT1 protein5161e-050
Q9C5N0 AT5g02480/T22P11_704686e-045
Q9LZ54 Putative uncharacterized protein T22P11_704221e-039

Arabidopsis top hits (Blast detail)Scoree value
AT2G37570.1 SLT1 (sodium- and lithium-tolerant 1)6413e-067
AT5G02480.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: SLT1 (sodium- and lithium-tolerant 1) (TAIR:AT2G37570.1); Has 60 Blast hits to 60 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4683e-047
AT3G12570.1 FYD3483e-033
AT3G12570.3 FYD3483e-033
AT3G12570.2 FYD3483e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members