Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN71042

FASTA Sequence
Unigene ID: UN71042Length: 725 SSR 
CGAAGCAAATCATTCTCCATTGAGACACACAAACTTTAACTACCAATTCATTGTCTGAATAGTACATTGTGATGTTATCAACATGA
ACAAAAAGAATCGTTACAACGATAAGAGATTCTAAATCAACAAAGAATCTGTTCTGTTCGAACTGATCATCCATCAAGACAGAAAC
TTTAGTTCCAATTCATTGTCCCAATCTCCCCTGATCTCTGGTGATTTAAGCAAACTCCTCGTCTTCATCATCTTCCTCTTCCTCAT
ACTCAGAATCAGACTCCTCCTCCTCCTCTCTTTCGGGTTGCATCAACGTACTCATGTCAAAAGAAGCTGGACCGGACTCAACTTCC
TCTATATCTATAGTATCATAACTCATCCTCTGTTCGAACTTCTCCTCTGAACAGTTCAGCATCCAAGCCAACGAACATTTAATCCC
CTTCTTGAACACCCTCTTGTGCCTCGGCTTCACCGTCGACTCCAACCCGTAAGTAAAGAACGCAGGGAAGTCCACGAGATCCTGAA
GAGGTCTTCTCATCTCCTTTAGGAAGAACTCAAAGCTAAGCTTCATGATCCCAATGTTCAAAGCCAGAACCTGAGGACACCCAATC
ACCATCTCCCTCGTCTGATCTACCGAGAAGCCACACTCTTTAAGGAACGCAATGTGCTCCAGCATAGGCGACTCGCTCAAGCTAAC
AAACTGTGGCATCCTCTCAACCAAAGAGCCGAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874884 mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata]7742e-080
NP_192208 Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]7707e-080
AAK55704 AT4g02990/T4I9_13 [Arabidopsis thaliana]7331e-075
XP_002273388 PREDICTED: hypothetical protein [Vitis vinifera]5843e-058
CAN74988 hypothetical protein VITISV_005102 [Vitis vinifera]5701e-056

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZT96 Putative uncharacterized protein AT4g029907705e-080
Q93WJ2 AT4g02990/T4I9_137331e-075
A5BTA9 Putative uncharacterized protein5708e-057
B9IA08 Predicted protein5502e-054
B9SFM8 Putative uncharacterized protein5313e-052

Arabidopsis top hits (Blast detail)Scoree value
AT4G02990.1 mitochondrial transcription termination factor family protein / mTERF family protein7812e-083
AT2G44020.1 mitochondrial transcription termination factor-related / mTERF-related3251e-030
AT2G21710.1 EMB2219 (embryo defective 2219)2085e-017
AT2G34620.1 mitochondrial transcription termination factor-related / mTERF-related1772e-013
AT2G03050.1 mitochondrial transcription termination factor-related / mTERF-related1502e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members