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Information for unigene UN71117

FASTA Sequence
Unigene ID: UN71117Length: 786 SSR 
GTCTAAATACATGTCAATATTACAAATAAATAAAAGAATGTATTCAAGGACCTACCAACCAATACCATATTACAGAATCAAATCAA
TTAGAAACTGAAATGAACAAAAGTAACTTAAAAGTAACCAAAAGTACTTCTGGCCAGCTATGATTAAAAATCTCAAGTTGGAAAAA
AAAATGAATCAAACTATGCTTCTGTTTGTCTTGCCTTTTGTACAGTTGGCCCCACATTGCTTCCTTAGTCTTCAAGTGAAAGTTAT
TGTAATTACCCTTCTCCCATCTTTACAAAAACGCACCTGATTCAACCACCATCGTTGCAGCTGCAGCCGCTTGATGTTTACCATTC
TGTTTCACTTGGTGCTGTGACCAGTGCCTATGTGCTGCCAAGACTCTGTCTAGCAGTTCTTGAGGCACTGGCTCTCCTCTTCGTTG
CTGCGGTGATATACTTGCCGTGTGAACCAATGTTTTCCACTTGTCCTTCAAGTCCACGTAAGTTCGATGACTTGCATCATCAAAAG
AACGTAATTTCACATCACGCCACCTTCCAGTCCCAAGTTCCTCAACTGCATGCACTAGAGATTCTACCTCTGTAACAGAGAACGGT
CTCCTGGTTCTGCGCTGTGAAACCTCTGTACGCTTAGGTTTCTCGTTAAGTGGGACAATTATTGCAAGAGCCTCAGTTCCAAGGCT
GAAACAGGAACTATAGCTCTTGAATCTGGTGACGGTTGTTGTTGTTGTTCATCAGCTGTTATGTCACTCTGATACGGAACTAGCTC
CTGGCTATTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871588 hypothetical protein ARALYDRAFT_488205 [Arabidopsis lyrata subsp. lyrata]5843e-058
NP_196886 Telomere repeat-binding protein 4 [Arabidopsis thaliana]5664e-056
AAC24592 H-protein promoter binding factor-1 [Arabidopsis thaliana]5664e-056
BAE99080 telomeric DNA-binding protein 1 [Arabidopsis thaliana]5664e-056
XP_002311174 predicted protein [Populus trichocarpa]5127e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFY9 Telomere repeat-binding protein 45662e-057
Q9C7B1 Telomere repeat-binding protein 35071e-050
Q6R0E3 Telomere repeat-binding protein 54488e-044
Q9SNB9 Telomere repeat-binding protein 24318e-042
Q8L7L8 Telomere repeat-binding protein 14022e-038

TrEMBL top hits (Blast detail)Scoree value
B9HMJ1 Predicted protein5125e-050
Q08707 BPF-1 protein5044e-049
Q1L0P9 At3g12560-like protein5027e-049
Q9FNS1 MYB-like DNA-binding protein5027e-049
B9HTH4 Predicted protein (Fragment)5001e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G13820.1 TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding5662e-058
AT3G12560.1 TRFL9 (TRF-LIKE 9); DNA bending/ DNA binding / telomeric DNA binding5071e-051
AT1G07540.1 TRFL2 (TRF-LIKE 2); DNA binding4488e-045
AT3G46590.1 TRFL1 (TRF-LIKE 1); DNA bending/ DNA binding / telomeric DNA binding4317e-043
AT3G46590.2 TRFL1 (TRF-LIKE 1); DNA bending/ DNA binding / telomeric DNA binding4317e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members