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Information for unigene UN71168

FASTA Sequence
Unigene ID: UN71168Length: 651 SSR 
GGACTCTGGATTGGATTAGAGTTTTGTTTTGTATTGTTCTCATTCGATATTTCAATCTTGTTTGCTTGCATCCCGTCCCTCCCGTC
GTATATAATAATAATAATCTCGGTCACACAAAAGTGATTTTTATCCGTTGATGATGATGGAGGAGAACAAGAGAAGCAGGTTCAGG
AAAGTTTGTGTCTTTTGCGGAAGCAACTCTGGTAATAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGCCAATGAACCCGTTTG
CCTCTCTCTCTCTCTCTCTAATGATTTGCTTATCACTTGGTTTCGTGATAAAGACACCAACTTTTCAAAACACTGAAGACAAAGAA
ATCAACAAAATAAGACTGAGAAAAAACAGAGCTTTTTGAATACCTAACATGGCTGGAACACATTGGGTTTGTGATTCTGTTTGTAC
TCTGTCTATTAGAGAATTTATATGTCCGGTCTTCCTCTGTTTTCTGGACGTGTTATCTTTTGTTTGGTTGTTTGGATTTTTAGTTG
ATGTTTACGTTCAATGTATCCTTTGGATTTGATTGTTTATCTGAAAAAAAAATTGTGTAGGTGAAGAGGAAGATAGACTTGGTTTA
TGGAGGAGGAAGTGTTGGGTTAATGGGTCTTATATCCAGGAGAGTCTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196756 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Arabidopsis thaliana]1666e-010
CAB87668 lysine decarboxylase-like protein [Arabidopsis thaliana]1666e-010
1YDH Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At5g119501612e-009
XP_002871507 hypothetical protein ARALYDRAFT_488037 [Arabidopsis lyrata subsp. lyrata]1585e-009
XP_002872198 predicted protein [Arabidopsis lyrata subsp. lyrata]1551e-008

Swiss-Prot top hits (Blast detail)Scoree value
Q84MC2 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG81663e-011
Q8LBB7 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG51242e-006
Q8LR50 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL11215e-006
Q5BPS0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG21206e-006
Q7XDB8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL101198e-006

TrEMBL top hits (Blast detail)Scoree value
A5C3Z8 Putative uncharacterized protein1512e-008
B9HDC8 Predicted protein1404e-007
C6T0I5 Putative uncharacterized protein1404e-007
B9RQS0 Carboxy-lyase, putative1371e-006

Arabidopsis top hits (Blast detail)Scoree value
AT5G11950.1 protein homodimerization1663e-012
AT5G11950.2 protein homodimerization1663e-012
AT4G35190.1 unknown protein1242e-007
AT2G35990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: carboxy-lyase (TAIR:AT5G06300.1); Has 3002 Blast hits to 3001 proteins in 744 species: Archae - 8; Bacteria - 1757; Metazoa - 10; Fungi - 79; Plants - 185; Viruses - 0; Other Eukaryotes - 963 (source: NCBI BLink).1206e-007
AT5G03270.1 unknown protein1162e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

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