 |
Information for unigene UN71193
| FASTA Sequence |
| Unigene ID: UN71193 | Length: 785 |
SSR | | GGGAAAATTTTATAATTTTCTCAGTCGGCACTGAGAGAGAGAGCTCAGAGAGAGAGAGAGAGAAAAAAAAAGATGGGAAGCGGTGT
AGCTCTCTTTACTCTCTCCCTCCTCCTCGCGACTCATCACACTCACTCCGCAATCGGCGTGAACTGGGGAACGGTGTCGTTCCACA
AGATGAAACCTTCCACAGTGGTGGATCTCCTCAAAGCAAACAAAATAACCAAAGTAAAGCTCTTCGACACAAACCCAGATGCACTC
CGAGCTCTAATGGGCTCTGGAATCCAAATCATGATCAGCATTCCCAACGACCTCCTCTCCACTTTCAACCCCGATCTCTTCGTCCA
GCAGAACCTCTCTCGCTTCATGGGCAAAGGCGGCGCTGACATCAGGTACGTTGCAGTGGGGAACGAGCCGTTCCTGACGAGTTACG
GCGGTGTGTATCAGAACTATGTCGTCCCAGCTATGGTTAACCTCCAGCAGTCTTTGGTTAAAGCGAATCTAGCTAGCTATGTGAAG
CTGGTTGTTCCTTGTAATGCAGATGCGTATGAGTCTAACGTTCCTTCCCAAGGGACGTTTAGGCCTGAGCTGACGCAGATCATGAC
TCAGCTGGTTTCGTTTCTCAGCTCAAACGGCTCTCCTTTTGTTGTCAATATCTACCCTTTCCTTAGTCTCTATCAGAACTCTGATT
TTCCACAAGACTTTGCGTTTTTGAAGGAGTAGCCATCCTGTTCTCGATGGTCCTACGTTATTACATGCCTTTGATGGAACTCGACA
CTCTTGTCTCG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65105 glycosyl hydrolase family protein [Brassica oleracea] | 1029 | 8e-110 |
| CAB10499 glucanase like protein [Arabidopsis thaliana] | 964 | 3e-102 |
| NP_193451 O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] | 956 | 2e-101 |
| XP_002870120 glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] | 926 | 7e-098 |
| XP_002329964 predicted protein [Populus trichocarpa] | 792 | 2e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M088 Glucan endo-1,3-beta-glucosidase 5 | 525 | 1e-052 |
| Q6NKW9 Glucan endo-1,3-beta-glucosidase 8 | 499 | 1e-049 |
| Q93Z08 Glucan endo-1,3-beta-glucosidase 6 | 497 | 2e-049 |
| Q9FGH4 Glucan endo-1,3-beta-glucosidase 9 | 468 | 4e-046 |
| Q8L868 Glucan endo-1,3-beta-glucosidase 11 | 261 | 4e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9F6 Glycosyl hydrolase family protein | 1029 | 5e-110 |
| O23562 Glucanase like protein | 964 | 2e-102 |
| Q8GYS2 Putative uncharacterized protein At4g17180/dl4625w | 956 | 2e-101 |
| B9N3V4 Predicted protein | 792 | 2e-082 |
| A5AZ63 Putative uncharacterized protein | 771 | 4e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17180.1 glycosyl hydrolase family 17 protein | 956 | 1e-103 |
| AT4G31140.1 glycosyl hydrolase family 17 protein | 525 | 9e-054 |
| AT3G04010.1 glycosyl hydrolase family 17 protein | 522 | 2e-053 |
| AT1G64760.1 glycosyl hydrolase family 17 protein | 499 | 9e-051 |
| AT1G64760.2 glycosyl hydrolase family 17 protein | 499 | 9e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
