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Information for unigene UN71217

FASTA Sequence
Unigene ID: UN71217Length: 644 SSR 
GGGACCGCCCCTCTCCAGTTTATTGTCCTTTGATTTTGCGGTAAGAACACACCTACCGTCGATCTTCTTATCTTGTCTCCTCCATT
TGCTTTTAGTTACTTTTCTTAATCTCTGACATTTCTGCTTTTAGTTTCCATCTCTGATTTCTTATCTCTCTCTCTCTTTCTCTCTA
TTGCACAGAAACACTTGTATCAGGCGAATCCCCGTTCCGTTCTTCTTCACTTTAGATCTGTAAGATACAGACATGATGATGAATAT
TTTATTCGGTTGAAACTTTATAAGATGGCTCGTCCACAAGACCCTCCACGCGGTTTCTTCCCTTTTGGAAACCCCTTCAGGAACCT
CTCTTCCAAGAACCCTGTACTATCCTCTAATCTTCTCTCCCTCTTGAACACTTTCGAGACCAACTTAGCTTCTTCCATTACCAAGC
TTGTCCCCAAGGAAAAGTCCCAAATCCTCACTCTTTCATGGATGAGCCAAGCTATGGTATCTCTTTGCCAGACCCACGATGCTATC
AAGACTCTTATAACCGCTCTTGAGTTTCCTGTCTCTGATTGGGAGGACAAGTGGGTCGATGTCTACCTAGACATCAGCGTCAAGCT
CCTTGACCTCTGCAACGCCTTTAGCTCTGAGCTTAGCCGCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892057 hypothetical protein ARALYDRAFT_470124 [Arabidopsis lyrata subsp. lyrata]5474e-054
NP_563630 protein BPS1 [Arabidopsis thaliana]5421e-053
NP_566063 uncharacterized protein [Arabidopsis thaliana]4453e-042
AAL24177 At2g46080/T3F17.27 [Arabidopsis thaliana]4453e-042
XP_002882050 hypothetical protein ARALYDRAFT_904061 [Arabidopsis lyrata subsp. lyrata]4363e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q9LMM6 Protein BPS1, chloroplastic5427e-055
A2Z9A6 UPF0496 protein 43179e-029
Q337C0 UPF0496 protein 43179e-029

TrEMBL top hits (Blast detail)Scoree value
O82360 Expressed protein4452e-042
Q93Z73 At2g46080/T3F17.274452e-042
B9GQC2 Predicted protein4112e-038
C6T7D5 Putative uncharacterized protein4112e-038
C6TFP8 Putative uncharacterized protein4093e-038

Arabidopsis top hits (Blast detail)Scoree value
AT1G01550.1 BPS1 (BYPASS 1)5427e-056
AT1G01550.2 BPS1 (BYPASS 1)5427e-056
AT2G46080.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: BPS1 (BYPASS 1) (TAIR:AT1G01550.2); Has 94 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4451e-044
AT4G01360.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: BPS1 (BYPASS 1) (TAIR:AT1G01550.2); Has 59 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2765e-025
AT3G61500.1 unknown protein1762e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members