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Information for unigene UN71237

FASTA Sequence
Unigene ID: UN71237Length: 663 SSR 
GATCCGTTTTGTGGTCAAAGGAATCACCATCAGGTTCTGTCTTTAGGAGAAGGAGGTGAAGAGTTGAGTTGGAGGGTGAAGGATGG
TCCGCAATACTCCCATTGTTTGTCCGAAGCGATTCAGATCGACGGGGTTTTGTATTACTTAGCTGATAACTTTGATGATTCGACAC
GTGTGGTTGTTCGCTTTGATGTTCGGTCTGAGGAGTTTGAGTTCATCGAAGCTGATTGCTTTGCTGGCCAAGAGGCTGTTAACTTG
ATTAACTACAAGGGGAAATTAGCTGGTGTTAACTGGAAGTACGTTAAAGGTGATGATGATGATGATGAGAAGATTGTTCTTGAGTT
GTCTTTGTGGGTTCTTGAAGATGTTGTCGAGATGAAAGAGTGGGTGAAGTCTGTTTACGTTTTGTCTGAGGAGAAGATTGTTCGTC
GTTGCAATTTCTCTGTTGCCGGGATGACTGAGGGAGGTGAGATTGTTTTGGCTATGGACTACACCGCGAAGGTTTATCACGTCTTC
TTCTTTGATCCGGAACAGAACACTCTCAGAAGCGTTCAAGTGCAAGGGTTTGGAGATAAGCTTGAAGCGATTGGGACTCGTGGGAG
GGTTCGTGTCTTTGTTGACTATGTTGAGGATCTCAGTGTTTACGATGAAAAGCAGCTCAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878163 F-box family protein [Arabidopsis lyrata subsp. lyrata]6102e-061
Q9SVX4 RecName: Full=F-box protein At3g575905457e-054
NP_191318 F-box and associated interaction domain-containing protein [Arabidopsis thaliana]5457e-054
XP_002878116 hypothetical protein ARALYDRAFT_907139 [Arabidopsis lyrata subsp. lyrata]5035e-049
CAB41197 putative protein [Arabidopsis thaliana]4462e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVX4 F-box protein At3g575905454e-055
Q8S8C7 Putative F-box protein At2g162203752e-035
Q9MAP1 Putative F-box protein At1g330203699e-035
Q9FIH4 Putative F-box protein At5g424303439e-032
Q0V7S0 F-box protein At1g473403232e-029

TrEMBL top hits (Blast detail)Scoree value
Q6ICX6 At3g575804462e-042
Q9SVX3 Putative uncharacterized protein F15B8.2304462e-042
Q9LER9 Putative uncharacterized protein T8M16_2203986e-037
Q9FX06 T3F24.4 protein3441e-030
Q1PEE7 F-box family protein-like protein3403e-030

Arabidopsis top hits (Blast detail)Scoree value
AT3G57590.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated type 3 (InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G57580.1); Has 891 Blast hits to 856 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 889; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).5453e-056
AT3G57580.1 F-box family protein4461e-044
AT3G56890.1 F-box family protein-related3984e-039
AT1G33020.1 F-box family protein3699e-036
AT1G47350.1 F-box family protein-related3447e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members