 |
Information for unigene UN71331
| FASTA Sequence |
| Unigene ID: UN71331 | Length: 770 |
SSR | | GGATTGAAGACGCGATCACATAACAAAACTATCGAATCATAAACGCACACTCTCTCTCTCTCTCTGTCAGTCTCTTGATCAATTCT
CTTCGAGTGTAGAGAGTGAAACCAAAACTATGGCTTCAGCTTTCAGCGCAACGTCTTCAATGGCCTCATCTTTGGCTCCTCCTCCT
TCGAACAGATTGTCATCTCTCGTTTCTGTCTCGACAAACTCTTTTGGAAAGAGTCAAGCTTTTGCTCAGAGGAAAGCAAGGTTTCC
CAAAATCTACGCGGCGGCGAAGCAGTTGCATTTCAATAAAGACGGGACTGCCATTAAGAAGCTTCAAGCTGGTGTGAACAAACTTG
CGGATCTTGTTGGAGTCACTTTAGGTCCTAAAGGAAGAAACGTTGTTCTTGAAAGCAAATACGGTTCTCCCAGAATCGTTAATGAT
GGTGTAACAGTTGCTAGAGAGGTTGAGCTTGAGGATCCGGTTGAGAACATTGGAGCTAAGCTAGTGAGACAAGCTGCTTCCAAGAC
TAATGACTTAGCTGGTGATGGAACTACGACTTCCGTTGTTCTTGCTCAAGGTCTCATCGCTGAAGGTGTCAAGGTGGTGGCTGCTG
GTGCAAACCCGGTTTTGATTACCAGAGGAATCGAGAAAACCACCAAGGCCCTTGTTGCCGAGTTAAAGAAGATGTCAAAGAGTGGA
AGATAGTGAACTCGCAGATGTAGCAGCGGTAAGTGCAGAACAACTACGAAGTAGCACATGATCGCAGAGCATGGCTAAGTGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864459 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 837 | 1e-087 |
| NP_001032083 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 834 | 3e-087 |
| BAF00280 RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] | 834 | 3e-087 |
| BAB11583 RuBisCO subunit binding-protein beta subunit precursor; chaperonin, 60 kDa [Arabidopsis thaliana] | 834 | 3e-087 |
| AAB39827 chaperonin-60 beta subunit [Solanum tuberosum] | 729 | 5e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21241 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 709 | 4e-074 |
| P21240 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 703 | 2e-073 |
| P08927 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 657 | 5e-068 |
| A4XJ09 60 kDa chaperonin | 454 | 2e-044 |
| B9MLY9 60 kDa chaperonin | 449 | 6e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z361 AT5G56500 protein | 834 | 2e-087 |
| Q0WRG9 RuBisCO subunit binding-protein beta subunit | 834 | 2e-087 |
| Q9FHA9 RuBisCO subunit binding-protein beta subunit; chaperonin, 60 kDa | 834 | 2e-087 |
| P93570 Chaperonin-60 beta subunit | 729 | 3e-075 |
| Q0W9E2 Beta chaperonin 60 | 715 | 1e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56500.2 ATP binding / protein binding | 838 | 4e-090 |
| AT5G56500.1 ATP binding / protein binding | 819 | 7e-088 |
| AT3G13470.1 chaperonin, putative | 706 | 9e-075 |
| AT1G55490.1 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding | 703 | 2e-074 |
| AT1G55490.2 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding | 703 | 2e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
