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Information for unigene UN71386
| FASTA Sequence |
| Unigene ID: UN71386 | Length: 567 |
SSR | | GGAAAACAGAGCAGAAAAACAGAGTCTTTCATCTTCTTCTTCTGGGGAGAGAGAGAGAGAGAGCTCTAACAATGGCGAACTTGGTC
TTATCCGAATGCGGCATAAGACCTCTCCCCAGAATCTACACCACACCCAGATCCACTTTCCTCTCTAACACCACCACCACCTTCAA
ACTCAGACCATCCCCTTCTTCTTCCACTTCTCTCTCGTTTCGTCTGAATGGGCTCTCCCCTAAGAACTGGGCGTTGAATGTAACCA
CACCTTTAACAGTCGACTCGTCTCCTCCTCCAATCGAGGAGGAACACGAAACTCAGAGATTCGACCCAGGCGCGCCTCCTCCGTTC
AACTTTGTGACTTACCTGCATCATCATGGTCATGAAGATAAGCTCCCTTGGTACCGTGGGAAGGAATGGAGTTACTTGAGAGGAGG
GCTTACAACATTGGATCGTGACTACGGAGTGATCAATAACATTCATCACGACATTGGAACTCATGTGATACATCATCTTTTCCCGC
AGATCCCACATTATCATCTAGTAGAAGCCACAGAAGCGACTAAACCAGTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB85467 chloroplast omega-3 fatty acid desaturase [Brassica juncea] | 418 | 3e-039 |
| NP_187727 omega-3 fatty acid desaturase [Arabidopsis thaliana] | 415 | 6e-039 |
| P48618 RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags: Precursor | 415 | 6e-039 |
| AAA61774 omega-3 fatty acid desaturase [Brassica napus] | 415 | 6e-039 |
| AAK63867 AT3g11170/F9F8_4 [Arabidopsis thaliana] | 415 | 6e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P46310 Omega-3 fatty acid desaturase, chloroplastic | 415 | 3e-040 |
| P48618 Omega-3 fatty acid desaturase, chloroplastic (Fragment) | 415 | 3e-040 |
| P48622 Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic | 411 | 9e-040 |
| P48619 Omega-3 fatty acid desaturase, chloroplastic | 405 | 4e-039 |
| P48621 Omega-3 fatty acid desaturase, chloroplastic | 405 | 4e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M4D4 Chloroplast omega-3 fatty acid desaturase | 418 | 2e-039 |
| A1E436 Omega-3 fatty acid desaturase | 415 | 4e-039 |
| C5J3R0 Chloroplast fatty acid desaturase 7 | 415 | 4e-039 |
| Q56ZV3 Omega-3 fatty acid desaturase, chloroplast | 415 | 4e-039 |
| Q94EW6 AT3g11170/F9F8_4 | 415 | 4e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 415 | 3e-041 |
| AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | 411 | 9e-041 |
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 381 | 3e-037 |
| AT3G12120.1 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 208 | 3e-017 |
| AT3G12120.2 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 208 | 3e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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