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Information for unigene UN71802

FASTA Sequence
Unigene ID: UN71802Length: 776 SSR 
ATAATTGGATTTATAATCCACTAAAATAAATAATCAAAACCAAAATAAAAGCTATTCGATACCAACGGTACTTTCCTTTCATGGAA
ATGTTCCAATAATGCGAACTTCCCAATAATAATAATAATAAATAGTCTTGAAAATGATTTTGAGGGGAAGAAAAAAAAAACAAAAA
CAGAACGCAGACGCACATCTCTATCTCTCTAATGCCACAACTTCATACAGAATCCAGACTTGACAACCGCAGACGCGCCACCTCCA
ACCGCAAAACAACGCTTAGCCAAAACGTGGTCGTTGAAAGTATGAACAAGCTGCTCAGCTAAATCCATAGGATCATCACTAAACGT
ATCAATGAATATCTTCACAACTCTAACCTCTTGTGGCGTCGCTCTTAAACCGTACCAAGTCAAAAACTTCTGTCTGAACTCCTTAT
CAATGTGTCCTAAAGACTCGAGCTGTCTTATGACACTCACGCAGTGCTTAAAACCAGTGTCTGATCCTCCGTTTGCCGAGTGATGA
TCACCGTTTTCTTTAACCGGTTTACCGTTTCTCGCTTGACGGTTCTTGGTTTGGTCCGACCTGAAGGGAGTGATGGGCAAACTAGC
ATCTGAACTGTTCCGGTTACTGACAAGATTGGTCGTAGTAACCGGGACTGGAGCTTCTTCCTCATCCAACAACACACTCCCTTCAA
CGTTCTTCTCCGTCTCCACAACGCTAGAGTCTTGTTTGTTGTTGTTCTGTAAGAGATTCTGAGGAGCAATGTAACCGTTGTTGGAC
TC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867362 hypothetical protein ARALYDRAFT_491730 [Arabidopsis lyrata subsp. lyrata]5673e-056
NP_194749 vernalization5/VIN3-like protein [Arabidopsis thaliana]5592e-055
NP_849471 vernalization5/VIN3-like protein [Arabidopsis thaliana]5592e-055
NP_974639 vernalization5/VIN3-like protein [Arabidopsis thaliana]5592e-055
AAZ30055 G-box interacting protein 2 [Arabidopsis thaliana]5512e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q9FIE3 Protein VERNALIZATION INSENSITIVE 32661e-022

TrEMBL top hits (Blast detail)Scoree value
Q3E9U4 Putative uncharacterized protein At4g30200.35592e-055
Q8GUH6 At4g302005592e-055
Q9SUM4 Nuclear coiled-coil protein AT4g302005592e-055
Q2QJG1 G-box interacting protein 2 (Fragment)5511e-054
B9ILX8 Predicted protein (Fragment)3315e-029

Arabidopsis top hits (Blast detail)Scoree value
AT4G30200.1 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.5608e-058
AT4G30200.3 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.5608e-058
AT4G30200.2 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.5608e-058
AT5G57380.1 VIN3 (VERNALIZATION INSENSITIVE 3); protein binding / zinc ion binding2686e-024
AT2G18880.1 VEL2 ((VERNALIZATION5/VIN3-LIKE))2273e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members