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Information for unigene UN71920

FASTA Sequence
Unigene ID: UN71920Length: 661 SSR 
GCATGACAAAGCTTTTCCATAAAAAATAACTGTAAAACAGAGTGCATCTCATCTCACAACAAAATTAAACCCTTCTCAACGCTGCA
AAAACTTTTTTCAAACAAGATCACTAAACATCTGTTTTCACTAACACAACTAGTGCGAGCACCATTGGAGTTTTAAGTTTTCCGGT
TTACTCCCACTTTGACTCACCTCCCAACCCGATTTCAACTCCCCAGGAAGCTCAACCACTGCACTCTTGCTCTGCTTATTGCCTGC
TTTCTTCTTCTTCTTGTTACCTTGAATATCTACCACTCTCACCACACCCGTCTCTTGCACACTGCTCCTCTTGCTCTTCTTCTCGA
CACCATCTCCAGAATCTTTCGACACATCTTCTTCCCTGGAAAAGACTTCAGCCAAAGAGGTTTCAGCATCATCGATAGCATCGATT
AACTTCTTAGGACCGGTAGCCTTTTTCTGTTTCTTCTCAGCAGCACCATCGTCATTGTTACCCAGAGTTCTCTTCTGCCTATCTTC
TTCCTTCTTTTCTACTTGAATTTGATCTATATCTGGATTGCTCTTAGACTTCTTCTTCTTCTTGTTACCTTCATTATCAGCTTCTT
CTTCTTCCTCCGACTTGTTTCTCTTAGAGCTCTTCTTGCTCTTTCTATCAACTTTGGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874063 hypothetical protein ARALYDRAFT_489085 [Arabidopsis lyrata subsp. lyrata]4472e-042
NP_568416 leucine-rich repeat-containing protein [Arabidopsis thaliana]4462e-042
NP_001190363 leucine-rich repeat-containing protein [Arabidopsis thaliana]4462e-042
XP_001754926 predicted protein [Physcomitrella patens subsp. patens]1542e-008
NP_504775 hypothetical protein C33G8.2 [Caenorhabditis elegans]1461e-007

Swiss-Prot top hits (Blast detail)Scoree value
Q9U7E0 Transcriptional regulator ATRX homolog1502e-009
Q8IX12 Cell division cycle and apoptosis regulator protein 11233e-006
Q54LY8 Uncharacterized protein DDB_G02862991199e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FMS0 AT5g22320/MWD9_114461e-042
A9RL63 Predicted protein1541e-008
Q18401 Putative uncharacterized protein1469e-008
A2F9I8 Putative uncharacterized protein1442e-007
Q9LW95 KED1442e-007

Arabidopsis top hits (Blast detail)Scoree value
AT5G22320.1 leucine-rich repeat family protein4461e-044
AT3G28770.1 unknown protein1242e-007
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase1198e-007
AT1G56660.1 unknown protein1134e-006
AT5G60030.1 unknown protein1117e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members