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Information for unigene UN71962
| FASTA Sequence |
| Unigene ID: UN71962 | Length: 813 |
SSR | | GGACCTCTCTCTCTCTCTCGTACCTCACCAAAAACACACAAAGAGCAAGAGAAAGAGAACGAACTCACAATGGCCACTTCCTTCTC
CGCTTCCATCTCCCTCCATCTCTTTCCTTCCAACCCTCTCTTCTCCTCTCCGCTCTGGCTTTGCTCAACGCTCTTCCCTCACCTCA
ATCCGCTCCACTTCTCGCCCGAGCTTCGTTGTCAAGGCTCAAACCGATGATCTTCCATTGGTTGGAAACAAGGCGCCTGATTTTGA
GGCTGAGGCTGTGTTCGATCAGGAGTTCATCAAGGTTAAGCTCTCTGAGTACATTGGGAAGAAGTATGTGATTCTCTTTTTCTACC
CTTTGGACTTCACTTTCGTCTGCCCAACAGAGATTACTGCCTTCAGTGACCGGTATGCAGAATTTGAGAAGTTGAACACAGAGGTG
TTAGGTATCTCTGTTGATAGTGTGTTCTCCCACCTTGCTTGGGTTCAAACTGACAGAAAATCTGGAGGACTTGGTGATCTCAACTA
TCCCCTTATATCAGATGTCACTAAATCAATCTCAAAATCTTTTGGAGTGCTCATCCATGACCAGGGAATAGCGTTGAGAGGGCTTT
TCATAATAGACAAGGAAGGAGTGATCCAACATTCAACCATCAACAATCTTGGTATTGGCCGAAGTGTTGATGAGACAATGAGAACC
CTTCAGCACTACAGTACATCCAGGAGAACCTGATGAAGTCTGCCTGCAGATGGAAGCAGGTGAGAGTAATGAAACTGACCCAAGCT
CAGCAAAGAGTATTTCTCAGCTATTAGTAATATCTACGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882740 2-cys peroxiredoxin, chloroplast [Arabidopsis lyrata subsp. lyrata] | 957 | 2e-101 |
| O24364 RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic; AltName: Full=Thiol-specific antioxidant protein; Flags: Precursor | 947 | 3e-100 |
| NP_187769 2-Cys peroxiredoxin BAS1 [Arabidopsis thaliana] | 942 | 1e-099 |
| CAA63909 2-Cys peroxiredoxin bas1 [Arabidopsis thaliana] | 937 | 4e-099 |
| AAM64537 putative 2-cys peroxiredoxin BAS1 precursor (thiol-specific antioxidant protein) [Arabidopsis thaliana] | 924 | 1e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O24364 2-Cys peroxiredoxin BAS1, chloroplastic | 947 | 1e-101 |
| Q96291 2-Cys peroxiredoxin BAS1, chloroplastic | 942 | 5e-101 |
| Q9C5R8 2-Cys peroxiredoxin BAS1-like, chloroplastic | 896 | 1e-095 |
| Q6ER94 2-Cys peroxiredoxin BAS1, chloroplastic | 791 | 1e-083 |
| Q96468 2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) | 774 | 1e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FUC5 2-Cys peroxiredoxin | 904 | 2e-095 |
| Q8LEA5 2-cys peroxiredoxin-like protein | 897 | 1e-094 |
| B9SVY3 Peroxiredoxins, prx-1, prx-2, prx-3, putative | 808 | 2e-084 |
| B3TLV1 Thioredoxin peroxidase | 799 | 3e-083 |
| B8AJ36 Putative uncharacterized protein | 799 | 3e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11630.1 2-cys peroxiredoxin, chloroplast (BAS1) | 942 | 4e-102 |
| AT5G06290.1 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin | 896 | 9e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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