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Information for unigene UN72047
| FASTA Sequence |
| Unigene ID: UN72047 | Length: 620 |
SSR | | GGAGAGAGAGAGAGATCTAGCAAGAGTGAGAGTCCCCTTTATTGTGATTCGGAGGGTGAGATCTCGAGCTCTGTGTTGGTTGGTTC
GCGTGAGATGAATTCTTAAGAAGAAAGAAAGAAAGAAAGATGAGTAAAGAGACCTCGTTTTTGGTACGGCAGCCTAGGTGCCTTGT
TCTCGTCGTTGCCCTTACGATTCTCCTCTTCTTCGCGCTCTCACACACCCGACGTAAAGAGGAGCAGAAACAATTCATCGAGGAGG
ATTACCAAGTTACACACAGAGTATTCCTCGATATTGATGTCGACGGCCAACGCTTAGGCAGGATCGTTATTGGATTATACGGCACT
CTTGTACCCAAAACCGCAGAAAATTTCAGGGCTTTATGCACAGGAGAGAAGGGAAAAGCTTCAAGCGGAAAGCCTCTACATTACAA
AGGAACACAGTTTCACCGTATAGTATCTGGATTCGTAGTCCAAGGAGGAGACGTAATCTACGGTGATGGAAAAGGGAGTGAATCAA
TCTACGGTGGTACCTTTCTTGACGAAAATTTCAAAGTTAAGCATTCACATGCAGGTGTTGTAGCGATGGGTAACACAGGACCTGAT
TCTAATGGCTCACAGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 689 | 1e-070 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 664 | 1e-067 |
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 659 | 4e-067 |
| XP_002313720 predicted protein [Populus trichocarpa] | 582 | 3e-058 |
| XP_002277717 PREDICTED: hypothetical protein [Vitis vinifera] | 570 | 8e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 458 | 4e-045 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 429 | 9e-042 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 422 | 6e-041 |
| P0C1I8 Peptidyl-prolyl cis-trans isomerase cyp6 | 401 | 2e-038 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 396 | 6e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 689 | 9e-071 |
| O49605 Peptidyl-prolyl cis-trans isomerase | 659 | 3e-067 |
| B9HR79 Predicted protein | 582 | 2e-058 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 559 | 1e-055 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 536 | 5e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 659 | 2e-069 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 458 | 4e-046 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 434 | 2e-043 |
| AT2G29960.2 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 428 | 1e-042 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 422 | 5e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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