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Information for unigene UN72115

FASTA Sequence
Unigene ID: UN72115Length: 756 SSR 
GACACTTATCTCTACCAATCTCTCTCTAATAAACTCTCTCTCTCTCGCTCGTGTAGACATGGACGTCGAACATAACAACTCCGGCC
ACATCGGTAGACCAACGGTGGATATTCCACCGAGAAAGCTTCTTTCCTCCGCCACGTCTCCTTCAAGTCCCTGTCTTGACGACAAA
GCTCAGAGAGAGTGTTGTCACGACTCCGACTCCGACGATCCTTACGCCGGCGACCATTTCCGGATGTACGAATTCAAGATCCGACG
GTGCACGCGCAGCCGTAGCCACGACTGGACCGACTGTCCTTTCGCTCACCCCGGCGAAAAGGCTCGTCGCCGCGACCCTCGACGGT
ATCACTACACCGGCGAAGTCTGTCCCGAGTTTCGCAACGGTGGCGGCGACTGTAGCCGCGGTGAGTTGTGCGGCTTCGCGCACGGC
GTTTTCGAGTGTTGGCTCCACCCGAGTCGTTACCGTACGGAAGCGTGTAAAGACGGTAAGCATTGTAAGAGAAAAATATGTTTCTT
CGCTCACTCTCCACGTCAGCTTAGAGTTCTTCCGCCGTCGGAAAATTTCGTCTCCGGCGGAGGTGGATCGGCGACGTCGGTGTTGA
GCAATAAGAATAACCGGTGCTGTATGTTTTGTTCCCACTCTCCTACGAGCACTCTCCTTGATTTTTCACGATCACCGACGCAATCT
CCGCCTTTATCTCCGCTGATAAATCTGCCGTATTTCACGCTGAGTCGCCGCACTCCGCCGTGGCGCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199239 zinc finger CCCH domain-containing protein 61 [Arabidopsis thaliana]10011e-106
XP_002863601 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]9965e-106
XP_002889476 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]7545e-078
BAC41895 unknown protein [Arabidopsis thaliana]7465e-077
NP_171875 zinc finger CCCH domain-containing protein 2 [Arabidopsis thaliana]7465e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKW2 Zinc finger CCCH domain-containing protein 6110016e-108
Q9ZWA1 Zinc finger CCCH domain-containing protein 27462e-078
Q6L4N4 Zinc finger CCCH domain-containing protein 355501e-055
Q9FU27 Zinc finger CCCH domain-containing protein 25259e-053
O82307 Zinc finger CCCH domain-containing protein 235241e-052

TrEMBL top hits (Blast detail)Scoree value
B9MYF5 Predicted protein6541e-066
Q5D6A7 Putative CCCH-type zinc finger transcription factor6452e-065
B9HGP6 Predicted protein6325e-064
B9RVV6 Putative uncharacterized protein5895e-059
A2Y194 Putative uncharacterized protein5502e-054

Arabidopsis top hits (Blast detail)Scoree value
AT5G44260.1 zinc finger (CCCH-type) family protein10015e-109
AT1G03790.1 SOM (SOMNUS); nucleic acid binding / transcription factor7462e-079
AT2G25900.1 ATCTH; transcription factor5241e-053
AT2G19810.1 zinc finger (CCCH-type) family protein5132e-052
AT4G29190.1 zinc finger (CCCH-type) family protein5088e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members