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Information for unigene UN72126
| FASTA Sequence |
| Unigene ID: UN72126 | Length: 380 |
SSR | | GGCTGCTGACTCTGTTATTGGACAAACTTCTAAAGCTGATGACAGTGTAAAGAAGGATAAAAAGAAGAAGAAGAAGGCTGAAGCAG
AGGAGGAGGAAGCCAAGACTGAGGAACCATCTAAGAAGAAGTCAAAGAAGAAGAAGGCTGAAGTAGAGCCTGAGACCGAAGAGCCT
AAGACTGAGGAACCTTCAAAGAAGAAGAAGAAGAGGAAGCATGAGGAAGAAGAAACTGAGATGCCTGCCAAGAAGAAGGATAAGAA
GAAGAAGAAGAGTGAGGCTTGAAGAGAGAGTTTATTGTCTTTTTGTTTTTGTTTCTTGCCCTTAGGTGTTATTTTGAAACTCTTAA
GAACTGGTCATCGATTTGTAAGGCTTATTAGTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 272 | 1e-022 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 265 | 7e-022 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 248 | 6e-020 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 243 | 2e-019 |
| BAD95124 putative SAR DNA-binding protein-1 [Arabidopsis thaliana] | 215 | 4e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 272 | 4e-024 |
| Q9MAB3 Probable nucleolar protein 5-2 | 243 | 8e-021 |
| Q9LD90 H/ACA ribonucleoprotein complex subunit 4 | 167 | 6e-012 |
| Q55FI4 Nucleolar protein 58 | 159 | 5e-011 |
| Q9VJ87 Pre-mRNA-splicing factor CWC22 homolog | 156 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q570R2 Putative SAR DNA-binding protein-1 (Fragment) | 215 | 3e-016 |
| D2UXB1 Predicted protein | 179 | 4e-012 |
| B9Q2P6 Putative uncharacterized protein | 170 | 5e-011 |
| A8Y4I3 Putative uncharacterized protein | 163 | 3e-010 |
| D3BCL2 NOP5 family protein | 163 | 3e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 272 | 5e-025 |
| AT3G05060.1 SAR DNA-binding protein, putative | 243 | 1e-021 |
| AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase | 168 | 5e-013 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 160 | 5e-012 |
| AT1G56660.1 unknown protein | 145 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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