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Information for unigene UN72356
| FASTA Sequence |
| Unigene ID: UN72356 | Length: 624 |
SSR | | GGAAAGCGGCAACGCATTTTCTCGCGCCACCTCTCTCTCTCTCTCTACAGTCCGATGTGAAAAAAAACGACGCTCAACGCTTTGAA
TCTTTCAGACAACAAGCTCTCCGGGAGAATCCCGGATAGCTTGTCGTCTCTGCGGCTTAGCCTTCTTGATCTGTCAAACAACAAGT
TATCAGGCCGTGTCCCGTTGAGTTTGTCGTCGTATAACGGTAGCTTCAACGGTAACCCTGGACTCTGCAGCATGACGATCAAGTCG
CTTAACCGGTGCATTAACTCTACAGGATCGGGTCGTGTCACGCGCATCTTTGTGACGTGTATAGTTCTCGGTTCACTGATCTTGCT
AGCCTCTCTAGTGTGTTTCTTGTACCTCAAGAAAAGCGAGAAGAAGGAAATGAGAACGCTGAGACACGAGTCTTGGAGTATAAAGT
CGTTCAGGAAGATGAGTTTCACCGAAGACGATATCATCGATTCGATCAAAGAAGAGAATTTAATCGGTAGAGGAGGTTGTGGAGAT
GTGTACAGAGTAGTACTCGGTGATGGTAAAGAACTCGCTGTGAAACACATTCGAAGCAGTAGTAGCACTGAGAAGAGCTTCAGCAG
CACGATGCCTATCCTCACTGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34167 unnamed protein product [Thellungiella halophila] | 808 | 2e-084 |
| XP_002889779 hypothetical protein ARALYDRAFT_888250 [Arabidopsis lyrata subsp. lyrata] | 798 | 3e-083 |
| XP_002889783 hypothetical protein ARALYDRAFT_888256 [Arabidopsis lyrata subsp. lyrata] | 798 | 3e-083 |
| NP_172468 leucine-rich receptor-like protein kinase [Arabidopsis thaliana] | 789 | 3e-082 |
| AAB60752 Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene [Arabidopsis thaliana] | 789 | 3e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJM4 Receptor-like protein kinase HAIKU2 | 375 | 2e-035 |
| C0LGX3 LRR receptor-like serine/threonine-protein kinase HSL2 | 247 | 1e-020 |
| Q9SYQ8 Receptor protein kinase CLAVATA1 | 226 | 3e-018 |
| C0LGR3 Probable LRR receptor-like serine/threonine-protein kinase At4g26540 | 166 | 3e-011 |
| Q9FL51 Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 | 161 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O04517 F21M12.36 protein | 789 | 2e-082 |
| Q3EDF6 Putative uncharacterized protein At1g09970.2 | 789 | 2e-082 |
| Q8W4B5 Leucine-rich repeat receptor-like protein kinase | 789 | 2e-082 |
| Q941F6 Leucine-rich repeat receptor-like kinase F21M12.36 | 789 | 2e-082 |
| B9R6R4 Receptor protein kinase CLAVATA1, putative | 538 | 3e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09970.1 LRR XI-23; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 789 | 2e-084 |
| AT1G09970.2 LRR XI-23; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 789 | 2e-084 |
| AT3G19700.1 IKU2 (HAIKU2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | 375 | 2e-036 |
| AT5G49660.1 leucine-rich repeat transmembrane protein kinase, putative | 261 | 3e-023 |
| AT5G65710.1 HSL2 (HAESA-Like 2); ATP binding / kinase/ protein serine/threonine kinase | 247 | 1e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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