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Information for unigene UN72369

FASTA Sequence
Unigene ID: UN72369Length: 672 SSR 
GGTGATTAAGAAAAACAAAAAAAAACTACAAAAATATAAAATTTTCTTTTTAATTTTAATAAAACAAAAAAATAAAACAATGAGAT
GCACAAACGTGTCCATATTATTAGCCTTGGTGATGGTGTTTGTTACACCGATGGTGTTGGCAGATGATGTAACACCAATTCCAGAG
GCCAAAGTTCAAGTGGAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCTAGATCCTGCTCTCGTAGCTGC
TGAGGCTGAGCCACGTACCATCACCGTGGATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTTCCTGCAG
CGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATACAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACA
TTGATGGGAGACCCCTAAGCAGCCTGAGGAGTCGAGCAACAAGAAGAGGGCCACTGCATCTGCTTCCAAAACACCTGTCCCAGCAA
AGAAGACCAAAACTGCAGTAGCAGCCACTCAGAACACTGAAGAGAAGAAGAAGAAGAGCGGGCACACAGCTACACCACACCCAGCT
AAAAAGGGTGGAAAGAGTCCTAACCAGGGCCCAGGTCAATCATCCGCTGGTAACAAGAAGCAATTCAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADH82125 pectinesterase [Brassica rapa subsp. pekinensis]5214e-051
XP_002871269 ATPPME1 [Arabidopsis lyrata subsp. lyrata]5143e-050
NP_177152 pectinesterase PPME1 [Arabidopsis thaliana]5108e-050
NP_568181 putative pectinesterase 48 [Arabidopsis thaliana]4964e-048
AAM65347 pectin methyl-esterase-like protein [Arabidopsis thaliana]4401e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q84WM7 Pectinesterase PPME15104e-051
Q9LY19 Probable pectinesterase 484962e-049
Q9LY17 Probable pectinesterase 503456e-032
Q9LY18 Probable pectinesterase 493285e-030
Q56WH4 Histone deacetylase HDT22131e-016

TrEMBL top hits (Blast detail)Scoree value
B9RA17 Pectinesterase3134e-027
B9RA18 Pectinesterase3134e-027
C6T9N2 Putative uncharacterized protein (Fragment)3028e-026
B9I449 Pectinesterase3001e-025
B9P7K8 Pectinesterase (Fragment)3001e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G69940.1 PPME1; pectinesterase5104e-052
AT5G07410.1 pectinesterase family protein4962e-050
AT5G07430.1 pectinesterase family protein3455e-033
AT5G07420.1 pectinesterase family protein3285e-031
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase2131e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members