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Information for unigene UN72391

FASTA Sequence
Unigene ID: UN72391Length: 679 SSR 
GACAAACACGTAGTACGATTCTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAAAACCTACGATCTTCTTCGTCAAGATTCG
AGTATGAAAGGAGGTAAATCAAAGACTGAAACCAGGAGCTCCAAGCTCTCTGTGGCGAAGAAGCCAGCTAAAGCAGCAGGTCGTAG
CAAAGCGGCGGCTAAGGATCCTAACAAACCAAAGAGGCCTGCTAGTGCCTTCTTCGTTTTCATGGAGGACTTCCGTCAGACTTACA
AGAAGGATCACCCCAACAACAAATCTGTTGCTGCTGTTGGTAAAGCTGGTGGAGAAAAGTGGAAATCCTTGTCTGACTCTGAGAAG
GCTCCCTTTGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTATGAGAAGACCATGAAAGCCTACAACAAGAAGCTGGGGGAAGGCCC
AAAGGAGGACGAGGAGGAATCTGACAAGTCCGTGTCCGAGGTGAATGATGAGGATGATGCCGATGATGGTAGTGATGAGGAGGAAG
ACGATGACTAAAGAAGTTGAAGCTGGTAGCATAATAGGGGCGCTACAAGGATCTCTGGGATGTTTTTTTCTTTTTTTTTTTTTCTT
TCTTATTTACTGATGTTTCAAGTTAGTAAGCTTGCCACTATCTCTCACTGATTCTGATTCTACGTGTAATGGAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33706 unnamed protein product [Thellungiella halophila]6603e-067
NP_564123 high mobility group B2 protein [Arabidopsis thaliana]6372e-064
NP_001077569 high mobility group B2 protein [Arabidopsis thaliana]6282e-063
AAF80615 F2D10.18 [Arabidopsis thaliana]6254e-063
NP_001031074 high mobility group B2 protein [Arabidopsis thaliana]6192e-062

Swiss-Prot top hits (Blast detail)Scoree value
P26585 HMG1/2-like protein5141e-051
P40619 HMG1/2-like protein4665e-046
P40620 HMG1/2-like protein4432e-043
P27347 DNA-binding protein MNB1B4316e-042
P40621 HMG1/2-like protein3582e-033

TrEMBL top hits (Blast detail)Scoree value
O49596 HMG protein6371e-064
A8MQZ3 Uncharacterized protein At1g20693.36281e-063
Q9LM85 F2D10.186253e-063
Q2V4M2 Putative uncharacterized protein At1g20693.26191e-062
P93047 At1g20690/F2D10_156056e-061

Arabidopsis top hits (Blast detail)Scoree value
AT1G20693.1 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6441e-067
AT1G20693.3 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6342e-066
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6288e-066
AT1G20693.2 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6252e-065
AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5992e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members