Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN72411

FASTA Sequence
Unigene ID: UN72411Length: 568 SSR 
GGAACCTAAACCCAAAATCCAAGTGACCCACCAAATGCTTCAATCCTCTTCCACTAAACAAAAAAAACAACTTACCCCCATCATAC
CCTTTTAGCCTAAACCCTCGCTAAACGCCAATCCTCAATATATATATATATAATAACAAGAACACACTTGATTAATTCATACCTCT
TTATATATGTAAAATTTTCATATCAAGACATGAAGAAATAAAGATCTAACCTACAGAACAGAAATAAACAAAAAAAGGCATGGGAA
GGTCACCGTGTTGTGAGAAAGCTCACACAAACAAAGGAGCATGGACAAAAGAAGAGGACGAGAGGCTCGTAGCTTACATTAAAGCA
CATGGCGAAGGCTGCTGGAGATCTCTCCCCAAAGCCGCCGGCCTTCTCCGGTGTGGCAAAAGCTGCCGTCTTCGGTGGATCAACTA
TCTCCGGCCTGACCTTAAGCGTGGAAACTTCACTGAAGAAGAGGACGAGCTCATCATCAAGCTCCATAGCCTTCTTGGCAACAAAT
GGTCGCTTATTGCTGGGAGATTACCGGGAAGGACAGATAACGAGATAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195574 transcription repressor MYB4 [Arabidopsis thaliana]5787e-058
AAC83582 putative transcription factor [Arabidopsis thaliana]5787e-058
ABQ81932 transcription factor MYB4 [Brassica rapa subsp. chinensis]5779e-058
ABQ81931 transcription factor MYB4 [Brassica rapa var. purpuraria]5779e-058
XP_002866812 hypothetical protein ARALYDRAFT_490626 [Arabidopsis lyrata subsp. lyrata]5779e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZP1 Transcription repressor MYB45784e-059
P81393 Myb-related protein 3085722e-058
P20026 Myb-related protein Hv15623e-057
P81395 Myb-related protein 3305571e-056
P20025 Myb-related protein Zm385533e-056

TrEMBL top hits (Blast detail)Scoree value
A5YJP5 Transcription factor MYB45777e-058
A5YJP6 Transcription factor MYB45777e-058
C5X6V2 Putative uncharacterized protein Sb02g0311905751e-057
A2Z3J1 Putative uncharacterized protein5741e-057
A6N0I6 Myb related protein hv1 (Fragment)5741e-057

Arabidopsis top hits (Blast detail)Scoree value
AT4G38620.1 MYB4; DNA binding / transcription factor5784e-060
AT4G09460.1 ATMYB6; DNA binding / transcription factor5462e-056
AT2G16720.1 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor5443e-056
AT1G22640.1 MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor5363e-055
AT4G34990.1 AtMYB32 (myb domain protein 32); DNA binding / transcription factor5311e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members