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Information for unigene UN72417
| FASTA Sequence |
| Unigene ID: UN72417 | Length: 743 |
SSR | | GACACACACAGTCTCTCTCTCTCTCGCTCATCTACGCCGCCGGGAAAGAAGTGACCACATCGTCAGGGTTTCACGGCGAAGATTGT
CAGTCCCCTAATCGGCGAAGCGTCATCAATGGCAACCATGGCTAGGTCGTTTCTGCAGGCGATATCTAAGGAAGAAGCGGTGGCTC
CTCCGCTCAGAGTTGTTCAGATCGAAGGACTGGCTGCGTTAAAGATAATAAAGCATTGCAAGGAGTTTGCACCGACTCTTGTCACG
GGGCAGCTGCTTGGACTTGATGTTGGTAGTGTTCTTGAAATCACCAATTGTTTCCCTTTCCCTGTGAGAGATGAGGATGAAGAGAT
TGAAGCTGATGGTGCTAACTATCAGCTTGAGATGATGAGGTGTCTCAGGGAGGTTAATGTTGACAACAACACTGTTGGCTGGTATC
AATCCACAGTTCTTGGATCTTATCAGACTGTTGAGTTGATTGAGACCTTCATGAATTACCAGGAGAACATCAAGAGATGCGTGTGC
ATCATATACGATCCCTCTAAAGCTGACCTAGGCGTCTTAGCCTTGAAGGCTTTGAAGCTTTCAGATTCCTTTATGGAGTTGTACAG
GGGGCGGAAACTTTACAGGCGACAAGTTGAGGGAAAAAACTTCTCGTGGATGGATATTTTTGAGGAAATACCTATCAAGGTTTCAA
ACTCTGCGCTTGTCAGTGCCTTTATGACCGAACTGGAGACTGATACACCTGTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563880 translation initiation factor eIF-3 subunit 3 [Arabidopsis thaliana] | 997 | 4e-106 |
| XP_002892604 TIF3H1 [Arabidopsis lyrata subsp. lyrata] | 997 | 4e-106 |
| AAG53614 eukaryotic initiation factor 3H1 subunit [Arabidopsis thaliana] | 994 | 8e-106 |
| XP_002266909 PREDICTED: hypothetical protein [Vitis vinifera] | 890 | 9e-094 |
| XP_002529804 eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] | 886 | 3e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5Z2 Eukaryotic translation initiation factor 3 subunit H | 997 | 2e-107 |
| Q54UD0 Eukaryotic translation initiation factor 3 subunit H | 520 | 3e-052 |
| A7SA47 Eukaryotic translation initiation factor 3 subunit H | 424 | 5e-041 |
| Q5PPY6 Eukaryotic translation initiation factor 3 subunit H | 395 | 1e-037 |
| Q6P381 Eukaryotic translation initiation factor 3 subunit H | 388 | 7e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SUY5 Eukaryotic translation initiation factor 3 subunit, putative | 886 | 2e-093 |
| A2Q5B8 Mov34-1 | 885 | 2e-093 |
| C6TN20 Putative uncharacterized protein | 885 | 2e-093 |
| A9P7W5 Putative uncharacterized protein | 880 | 9e-093 |
| B9IA95 Predicted protein | 870 | 1e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G10840.1 TIF3H1; translation initiation factor | 997 | 2e-108 |
| AT1G10840.2 TIF3H1; translation initiation factor | 574 | 2e-059 |
| AT5G23540.1 26S proteasome regulatory subunit, putative | 118 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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