 |
Information for unigene UN72509
| FASTA Sequence |
| Unigene ID: UN72509 | Length: 748 |
SSR | | GGGTCCTCTTCCAATTTGTATAACCTTGAGCACCTTCCCGAGACTTTCACCTCTTTCTGCTCTCATGGATTCTTCGAATCTCGGTT
CTTCCAGCAAACCGGCATTCTCTTCCTTCTCCCAATCCAGCAGAAGCGGCGGTATAGGAAGAGGAAACGAGAGAGATAATGATCGT
CGGAGACCTCAGGGTCGTGGCGACGGCAGAGGAGGAGGAGGAGGCAAAGATAAAATCGATGCACTTGGAAGACTCTTGACGAGAAT
CTTGCGACATATGGCTACTGAGCTGAGACTGAACATGAGAGGCGATGGTTTTGTTAAAGTCGAAGACTTGCTTCAGCTGAATCTGA
AAACATCCGCAAACATTCAGTTGAAGTCTCATACCATTGATGAGATCAGAGAGGCAGTGAGAAGGGATAATAAACAACGTTTTAGC
GTCGTTGAAGAGAATGGAGAGCTCTTTATTCGCGCTAACCAAGGCCACTCTATCACGACGGTTGAATCTGAAAAGTTACTTAAACC
AATACTGTCACCGGAAGAAGCTCCAGTGTGTGTGCATGGAACTTATAGGAAGAATTTGGAATCCATCTTGGCATCGGGGTTAAAGC
GTATGGATAGACTCCATGTTCACTTTTCTTGTGGCTTACCTACAGATGGTGAAGTGATAAGTGGCATGAGAAGGATGTTAATGTCT
TGATCTTCCTTGACATCAAGAAAGCTCTTGAAGATGGGATTGCATTCTACATTTCAGACA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182058 putative tRNA 2'phosphotransferase [Arabidopsis thaliana] | 943 | 7e-100 |
| BAF00210 hypothetical protein [Arabidopsis thaliana] | 933 | 9e-099 |
| NP_001031541 putative tRNA 2'phosphotransferase [Arabidopsis thaliana] | 923 | 1e-097 |
| XP_002880172 hypothetical protein ARALYDRAFT_483669 [Arabidopsis lyrata subsp. lyrata] | 912 | 3e-096 |
| AAB82630 unknown protein [Arabidopsis thaliana] | 906 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5EAR5 tRNA 2'-phosphotransferase 1 | 277 | 5e-024 |
| Q8K3A2 tRNA 2'-phosphotransferase 1 | 260 | 5e-022 |
| Q3ZBM7 tRNA 2'-phosphotransferase 1 | 235 | 4e-019 |
| Q86TN4 tRNA 2'-phosphotransferase 1 | 229 | 2e-018 |
| O14045 Putative tRNA 2'-phosphotransferase | 214 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WRN9 Putative uncharacterized protein At2g45330 (Fragment) | 933 | 7e-099 |
| Q2V406 Putative uncharacterized protein At2g45330.2 | 923 | 1e-097 |
| O22139 At2g45330 | 918 | 4e-097 |
| Q9LT04 At5g23600 | 712 | 3e-073 |
| B9RDA5 Putative uncharacterized protein | 690 | 1e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G45330.1 emb1067 (embryo defective 1067); tRNA 2'-phosphotransferase/ transferase, transferring phosphorus-containing groups | 943 | 3e-102 |
| AT2G45330.2 emb1067 (embryo defective 1067); tRNA 2'-phosphotransferase/ transferase, transferring phosphorus-containing groups | 923 | 6e-100 |
| AT5G23600.1 tRNA 2'phosphotransferase, putative | 712 | 2e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
