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Information for unigene UN72543
| FASTA Sequence |
| Unigene ID: UN72543 | Length: 741 |
SSR | | GAACAAATTGAAAAAGACCATGGAAGCTGATAGATCGTCTCACTCGTCTCTGAGTAGAAGAGGAAGCATTAACCAGGGATCAGATC
CCATTGACAAAGATGACAAGTTGGATTCTAGATCCGATGGACAGTTAGCTAGATTTTCGTTGATGGACTCCAAGAGACAAGTGGAC
AGTCGAAATAAGAAGAACAAGAAATACGAGTTCAGTAGTAGTAGTAGTAGCCGTGTGTCGCCTATACCAAGTCGTAGCTCTCAACG
AGGAGCGCTTAGCATAGCCAAGACCTTCAATCCAGTATTCGGAGCGTCAAAGAAGTTCTTCTCAGCTTCTGTTCCTGGTTCTCGAA
TCGTGTCTCGGGCAACTTCTCCAATTTCAAGACGTCCAAGTCCACCTCGTTCAACTACACCAACCCCCACTCTTTCAGGACTAACC
ACACTAAGAATCGTGGTGGATGATACTAAGAGAACTAATGATAGTATAAGCCAAGAGGTTGTGAAGCTACGATCTCAGGTTGAAAG
TCTTACAAGGAAGGCACAGTTTCAAGAAGTTGAGCTGGAAAGAACAGCCAAGCAGCTCAAAGAAGCGTTGGCAATCGCTAGCGAAG
AAACGACAAGATGCACAGCGGCAAAAGAAGTGATCAAATCACTTACCGCTCAATTGAAAGACATGGCTGAAAGATTACCAGTTGGA
TCAGTTCGAACTGTGAAGTCTCCTTCGTCTCTTAACTCATTTGGTTCCAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871523 ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata] | 1073 | 5e-115 |
| CAC42896 putative protein [Arabidopsis thaliana] | 1068 | 2e-114 |
| NP_568268 Regulator of chromosome condensation-like protein with FYVE zinc finger domain-containing protein [Arabidopsis thaliana] | 1068 | 2e-114 |
| XP_002873947 hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp. lyrata] | 992 | 1e-105 |
| NP_197443 regulator of chromosome condensation-like protein with FYVE zinc finger domain [Arabidopsis thaliana] | 988 | 4e-105 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94CK7 Putative uncharacterized protein At5g12350 | 1068 | 1e-114 |
| Q3E9B7 Putative uncharacterized protein At5g19420.1 | 988 | 3e-105 |
| B9SM24 Ran GTPase binding protein, putative | 870 | 1e-091 |
| B9HNF1 Predicted protein | 854 | 9e-090 |
| B9GG94 Predicted protein | 851 | 2e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G12350.1 Ran GTPase binding / chromatin binding / zinc ion binding | 1068 | 9e-117 |
| AT5G19420.1 Ran GTPase binding / chromatin binding / zinc ion binding | 988 | 2e-107 |
| AT1G76950.1 PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding | 365 | 3e-035 |
| AT5G42140.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein | 297 | 2e-027 |
| AT1G69710.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein | 184 | 3e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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