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Information for unigene UN72592
| FASTA Sequence |
| Unigene ID: UN72592 | Length: 622 |
SSR | | GGAGTGTTTGAGCATTCTCTCATCTCTCCAAGCCAAACCTCTCTCTCTATCTCTCTGTGTGCTTGTGTGGCCATGGCTAACTCGAT
AATGGCTTCCTCCAAACCCCTCATCTTCCTCTCCTCCTCCTCAACTCAACCAAGCCGCGTCCACCTCCCCGCCAAACTCCCCCAAA
TCCCCAAACCCATCTCCTCCTCCTCCTCCTCCTCCGACCTCCGCAGCAAGGCTCTGTCTTTCTCCTCCGCCACCGTAAAGTCTCTA
GCTTTAATCGCGGCCCTGGCTCCTCCCTCGATGGCCGAAGCGATGGAGAAGGCGCAGCTCTTCGACTTCAACCTGGCGCTCCCGAT
CATCGTCGTGGAGTTTCTCTTCCTCATGTTCGCGCTGGACAAGGTGTACTACTCGCCGCTGGGGAACTTCATGGACAAGAGAGACG
GAGAGATCAAGGAGAAGCTGGCGAGCGTGAAGGACACATCCACGGAGATCAAGGCCCTCGATGAACAAGCCGACTCTGTGATGAGG
GCTGCTAGGGCTGAGATCGCCGCCGCGCTTAACAAGATGAAGAAAGAGACGGAGGCGGAGGTAGAGGAGCAGCTGGCGGAAGGAAG
GAAGAAGTGGAGGCGGAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194953 F-type H+-transporting ATPase subunit b [Arabidopsis thaliana] | 692 | 6e-071 |
| XP_002867251 ATP synthase family [Arabidopsis lyrata subsp. lyrata] | 686 | 3e-070 |
| AAK68813 H+-transporting ATP synthase-like protein [Arabidopsis thaliana] | 684 | 5e-070 |
| BAF01532 ATPase b'-subunit [Arabidopsis thaliana] | 518 | 8e-051 |
| ABK95102 unknown [Populus trichocarpa] | 516 | 1e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P31853 ATP synthase subunit b', chloroplastic | 457 | 5e-045 |
| A8J785 ATP synthase subunit b', chloroplastic | 229 | 1e-018 |
| Q31RF4 ATP synthase subunit b' | 155 | 5e-010 |
| P08446 ATP synthase subunit b' | 155 | 5e-010 |
| O78478 ATP synthase subunit b', chloroplastic | 149 | 3e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q42139 AT4g32260/F10M6_100 | 692 | 4e-071 |
| Q94B39 H+-transporting ATP synthase-like protein | 684 | 3e-070 |
| Q0WMW8 ATPase b'-subunit | 518 | 6e-051 |
| A9PFE9 Putative uncharacterized protein | 516 | 1e-050 |
| A9PE72 Putative uncharacterized protein | 509 | 6e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32260.1 ATP synthase family | 692 | 3e-073 |
| AT1G44191.1 Encodes a ECA1 gametogenesis related family protein | 118 | 1e-006 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 117 | 1e-006 |
| AT1G12040.1 LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1); histidine phosphotransfer kinase/ protein binding / structural constituent of cell wall | 111 | 6e-006 |
| AT4G33970.1 protein binding / structural constituent of cell wall | 111 | 6e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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