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Information for unigene UN72675
| FASTA Sequence |
| Unigene ID: UN72675 | Length: 650 |
SSR | | GGGGAGACAAAACCCCACCAACTTCTATCATTCTCTCTGTTGGTTCGTTCATCAAATCGTTTCCTTAATCTGATGAACTGAAATCA
TTATGTCTCTCCCTCCCTCTCTCTCTCTCTCTCTTGATCTCTACTCAAACATGGCAATTTGATTTTTGATGAGCAAAATTTGATTA
TTTTTTTTTCTTTTTTTTGGCAAAGCTCACCAAAGATTCAAAAGTTTTAATACTGTCGTTATCTGTGTCATCCCTTCACTGATTCA
AAATTTGGCAATGGCTTCTAAGATTAAAACTGGTGCATCCGAAACCACTCTGAGCAAATCATCTCCAGGATCTCTGAGAGTGCCTA
AACTGACCCGCATTACGACTAGATCTGAACCTAATACTCCTTCACCAACTCAACAACACTCACGGCTTGACCGCTCTTTCGCTAAT
TCAAAGCCTCCTTCTGAAAAGAGGTCTCCTAAAGTTCCAACTCCACCAGAGAAAACTCAAACACGAGCTGTGAGAGGATCGGAGTC
TCCTCAGCCTCGGTTGGTCCAGATGAAGGAAGATCTGAGGAAAGCAAATGAGATGATAGCATCACTCGAGGATGAAAAGGCTAAAG
CCTTTGATGGGCTGCTCAAAGCGAAGAAAGACGCTGAAGAGCTTCAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882261 hypothetical protein ARALYDRAFT_896273 [Arabidopsis lyrata subsp. lyrata] | 429 | 2e-040 |
| NP_186943 uncharacterized protein [Arabidopsis thaliana] | 412 | 2e-038 |
| NP_001189797 uncharacterized protein [Arabidopsis thaliana] | 386 | 2e-035 |
| NP_197175 uncharacterized protein [Arabidopsis thaliana] | 312 | 7e-027 |
| BAD94516 putative protein [Arabidopsis thaliana] | 312 | 7e-027 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M8T5 F13E7.12 protein | 412 | 1e-038 |
| Q56Y73 Putative uncharacterized protein At5g16730 (Fragment) | 312 | 5e-027 |
| Q9LFE4 Putative uncharacterized protein F5E19_70 | 312 | 5e-027 |
| B9S250 ATP binding protein, putative | 265 | 1e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02930.1 unknown protein | 412 | 8e-041 |
| AT5G16730.1 LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02930.1); Has 241703 Blast hits to 112530 proteins in 2711 species: Archae - 2642; Bacteria - 41887; Metazoa - 104467; Fungi - 18239; Plants - 8786; Viruses - 1373; Other Eukaryotes - 64309 (source: NCBI BLink). | 312 | 3e-029 |
| AT1G65010.1 unknown protein | 209 | 3e-017 |
| AT4G27595.1 unknown protein | 150 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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