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Information for unigene UN72717
| FASTA Sequence |
| Unigene ID: UN72717 | Length: 718 |
SSR | | GAGAGAGAAAACCACATCCTTGTGAAGCGTTTAAGAGGAAGAAGAAGAAGAAGAAGAAGATAAATCGATTCTTTATCTGGAAATTC
AATGGCGGTTTCTTCTGTAACTTCCTTCATATTACCCTCTTTCGCCAACCTTTCATCTTCTTCTTCTTCCACCAAACAGAAAGTCT
CTTTGCTTCCATCTTCTTCTTCTTCTTCGTCTACTCATGGCGGCATTGGCTCCTGCGTCCTTAACAAACCCTCCATCTCGTTTACG
AAGAAGGTCTTCGCAGCTCCCGAGACCCTTACTCCGGAAACCCTCGATGAACCCGCCTCTGATGACTTCTCCGAGGTTCCGAGCTC
TTCCTCAATAAGTGTTGACGCAGATAAGATGGCGCCAAAGCAAAAGATTAGGATAAAGCTTAGGTCACACTGGGTGCCTCTCATTG
AGGACTCATGCAAGCAGATACTAGACGCTGCGAGGAACACCAATGCCAAGACGATGGGTCCTGTTCCCTTGCCAACCAAGAAGCGT
ATCTACTGTGTTCTCAAGTCTCCCCACGTCCACAAGGATGCAAGGTTCCATTTTGAGATCAGGACTCACCAGCGGATGATTGGTAT
TCTCTACCCTACTGCTCAAACCATCGACTCCTTGATGCAGCTGGATCTTCCTGCTGGTGTTGATGTGGAAGTGAAGCTCTGAAACT
ACAATGAGCGATGGGCACTTGCATTGCATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAW22623 30S ribosomal protein S10-like [Brassica napus] | 875 | 5e-092 |
| ABL97980 30S ribosomal protein S10-like [Brassica rapa] | 851 | 3e-089 |
| NP_187919 30S ribosomal protein S10 [Arabidopsis thaliana] | 787 | 7e-082 |
| ABB97026 unknown [Brassica rapa] | 777 | 1e-080 |
| XP_002884945 hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata] | 769 | 9e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK61 30S ribosomal protein S10, chloroplastic | 787 | 4e-083 |
| Q9M4Y3 30S ribosomal protein S10, chloroplastic | 588 | 4e-060 |
| P17009 Cyanelle 30S ribosomal protein S10 | 342 | 1e-031 |
| B7K833 30S ribosomal protein S10 | 337 | 5e-031 |
| P51286 30S ribosomal protein S10, chloroplastic | 335 | 9e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5MD13 30S ribosomal protein S10-like | 875 | 3e-092 |
| A1YMX4 30S ribosomal protein S10-like | 851 | 2e-089 |
| Q2V615 Putative uncharacterized protein | 777 | 7e-081 |
| B9I1A1 Predicted protein | 614 | 6e-062 |
| A5BC08 Putative uncharacterized protein | 603 | 1e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13120.1 30S ribosomal protein S10, chloroplast, putative | 811 | 5e-087 |
| AT3G47370.2 40S ribosomal protein S20 (RPS20B) | 111 | 8e-006 |
| AT3G45030.1 40S ribosomal protein S20 (RPS20A) | 111 | 8e-006 |
| AT3G47370.1 40S ribosomal protein S20 (RPS20B) | 111 | 8e-006 |
| AT3G47370.3 40S ribosomal protein S20 (RPS20B) | 111 | 8e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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