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Information for unigene UN72801
| FASTA Sequence |
| Unigene ID: UN72801 | Length: 611 |
SSR | | GAGAAAATCAATATATATATATATATGCATTATATAACCACTTGATACTGCTGATTTCAAAACAACGAAGCAAGTGATGGATGTTA
AACAAGAAAGAAAACAACGTTTGACAATTGTGAGATCACAAGATCATGTGTACCATTGAGGCCCGTTTAAAGCGTGTATAGAAACT
ATTTAGTAACCATTGGGGATAGACTTGTCCTGAGTTTCTTCAGGGGAGAACACGAAAGGGCCAACGGTGAAGAGCTTCATCTTAAG
CTTGTTTTCTATAAAACGATATGTCTGGAGAATGGCTCCGCTAATTCCACGGTTGATCTCGGTCGGATAAAAACAGGTATCAGCTG
GAAAAAGCTCAAGAAACGCTCTGCACTCTTTAATCTTGATCACCTTGTTCTTTAACCCCTTCACCTCCGATGAAAAAAGCGTCCCC
AGGAAATAACCCTTAGCATCCGTCGCTTGGCTAAGCACCGTCACATCCTCTCCCTCGTAACCGTATTCGTCCGCCGTCTCGCATGT
CACCCTCGCCACCGCACCTTGGAGAGGGGTAAGCTTGGATCCTTGTTTACAGTAAATGAAACCTTGAACTCCGATCATGGAAGAAA
GTAGTTCTC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002880311 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata] | 647 | 9e-066 |
| NP_182276 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana] | 630 | 8e-064 |
| XP_002523122 structural constituent of cell wall, putative [Ricinus communis] | 381 | 6e-035 |
| XP_002302729 predicted protein [Populus trichocarpa] | 360 | 2e-032 |
| ADK26058 drought resistance protein [Glycine max] | 336 | 1e-029 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O22257 Putative uncharacterized protein At2g47540 | 630 | 6e-064 |
| B9SAV3 Structural constituent of cell wall, putative | 381 | 4e-035 |
| B9GSD1 Predicted protein | 360 | 1e-032 |
| C6T5T7 Putative uncharacterized protein | 335 | 9e-030 |
| A5B1Z7 Putative uncharacterized protein | 315 | 2e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47540.1 pollen Ole e 1 allergen and extensin family protein | 631 | 3e-066 |
| AT4G02270.1 pollen Ole e 1 allergen and extensin family protein | 272 | 1e-024 |
| AT2G47530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: PRP3 (PROLINE-RICH PROTEIN 3); structural constituent of cell wall (TAIR:AT3G62680.1); Has 105 Blast hits to 105 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 220 | 1e-018 |
| AT1G54970.1 ATPRP1 (PROLINE-RICH PROTEIN 1); structural constituent of cell wall | 117 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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