Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN72826

FASTA Sequence
Unigene ID: UN72826Length: 672 SSR 
GGATCGAAACGTAGCCCTATCAAACAAACACAACAGTCTCTCTCTCTCTCTCTCTCTCTCGCTCATCCCCTCGCCGTCGGCAAAGA
AGTATCACATCGTCAGTGTTTTCACGGCGGAGAAGCTTTCATCATCACCACCACCCTAGATTGTTATCATTCAATTCAATGGCAAC
CATGGCTAGGTCGTTTCTGCAGGCGATATCTAAGGACGAAGCGGTGGCTCCTCCGCTTAGAGTTGTTCAGATCGAAGGACTGGTAT
AGTGCTGTGTTAAAGATAATCAAACACTGCAAGGAGTTTGCACCAACGCTTGTCACAGGGCAGCTGCTTGGACTTGATGTTGGCAG
TGTCCTTGAAATCACCAATTGTTTTCCTTTCCCTGTGAGAGATGACGATGAAGAGATTGAAGCTGATGGTGCTAACTACCAGCTTG
AGATGATGAGGTGTCTCAGGGAGGTTAATGTTGACAACAACACTGTTGGCTGGTATCAATCCACTGTGCTTGTATCTTATCAGACT
GTAGAACTGATTGAGACCTTCATGAATTACCAGGAGAACATCAAGAGATGTGTGTGCATCATATACGATCCCTCTAAAGCTGACCT
AGGCGTCTTAGCCTTGAAGACTTTGAAGCTTTCAGATTCCTTTATGGAGTTGTACAGGGGCGGAAACTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563880 translation initiation factor eIF-3 subunit 3 [Arabidopsis thaliana]7008e-072
XP_002892604 TIF3H1 [Arabidopsis lyrata subsp. lyrata]7008e-072
AAG53614 eukaryotic initiation factor 3H1 subunit [Arabidopsis thaliana]6972e-071
ABN08818 Mov34-1 [Medicago truncatula]6433e-065
XP_002266909 PREDICTED: hypothetical protein [Vitis vinifera]6424e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5Z2 Eukaryotic translation initiation factor 3 subunit H7004e-073
Q54UD0 Eukaryotic translation initiation factor 3 subunit H4056e-039
A7SA47 Eukaryotic translation initiation factor 3 subunit H3322e-030
Q6AXJ2 Eukaryotic translation initiation factor 3 subunit H-A2882e-025
Q5PPY6 Eukaryotic translation initiation factor 3 subunit H2882e-025

TrEMBL top hits (Blast detail)Scoree value
A2Q5B8 Mov34-16432e-065
B9SUY5 Eukaryotic translation initiation factor 3 subunit, putative6389e-065
C6TN20 Putative uncharacterized protein6361e-064
A9P7W5 Putative uncharacterized protein6299e-064
B9IA95 Predicted protein6299e-064

Arabidopsis top hits (Blast detail)Scoree value
AT1G10840.1 TIF3H1; translation initiation factor7004e-074
AT1G10840.2 TIF3H1; translation initiation factor4073e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members