Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN72848

FASTA Sequence
Unigene ID: UN72848Length: 728 SSR 
TTTTTTTCCTCTCTGCAGTAGCATCCATAGGGGGAAAGAGAGAGAGAGAGAGAGAAAGCTCTATAATGGCAAAATGAACAAAGCAC
TTTCACAAACTCTTATCCTCATAAGAGGAAGATAAATAAGATGGCTTTAGAAGAAGAGGAAGAGGTTCAAAACGCACCGTTTTGTA
TGCTTTTCTGCGAGGAAGAGAGCCATGAGTTAGAGGGAGACGAGAGCGTCGTAAAGTTTCCGTTTTTACATCCGGGTTTTCTCGAT
CACGACATGTTGTGGGGTGACGATGAGTTACTAGGTTTGATTTCGAAAGAAAACGAGCTAAGGCCGTGTCTTTCCGACACAGTGTT
AGATGAGTTTCTTGTCCTGTGCCGCGAGAAGGCTCAGCTCACAGCTGCTAAAGTTGAAGAGATCCGTGTTCCGTTGCTCTTAGATC
TTCAGGTGGGAGAGCCAAGATATGTCTTTGAGGCTAAAACCATACAGAGAATGGAGCTTTTGATTCTCTCTACTCTTGAATGGAGG
ATGCATCCCGTGACTCCAACCTCGTTTTTCGATCACATCATGCGTCGGTACAGCTCTAAGTCTCACCAGGACTTGGAGTTCTTGAG
TAGGTGTGAATCTTTGTTGCTCTCCGTTGTTCCTGATTCGAGGTTTCTAAGTTACAGTCCTTCTGTTTTGGCACTGCAATAATGGT
CTCTGTTGTTAGAGATTTCAGACGTGTGGCGAAGCTGAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190576 cyclin-D3-3 [Arabidopsis thaliana]4231e-039
XP_002877727 CYCD3_3 [Arabidopsis lyrata subsp. lyrata]4203e-039
XP_002866711 CYCD3_2 [Arabidopsis lyrata subsp. lyrata]3862e-035
NP_201527 cyclin-D3-2 [Arabidopsis thaliana]3801e-034
CBI33773 unnamed protein product [Vitis vinifera]3665e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q9SN11 Cyclin-D3-34236e-041
Q9FGQ7 Cyclin-D3-23806e-036
P42753 Cyclin-D3-13304e-030
Q4KYM5 Cyclin-D4-22311e-018
Q6YXH8 Cyclin-D4-12221e-017

TrEMBL top hits (Blast detail)Scoree value
B9SG00 Cyclin d, putative3638e-033
Q6QH76 Cyclin D3-23531e-031
Q7XAB7 Cyclin D3-23531e-031
A8Y911 D3-type cyclin (Fragment)3484e-031
B9GHC7 Predicted protein3484e-031

Arabidopsis top hits (Blast detail)Scoree value
AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase4235e-042
AT5G67260.1 CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinase3805e-037
AT4G34160.1 CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein binding3303e-031
AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator2174e-018
AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding2032e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members