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Information for unigene UN72896
| FASTA Sequence |
| Unigene ID: UN72896 | Length: 691 |
SSR | | GCTCAGGATTTAGATGTTGAATGGAATGTCGATGGTTCTGTCCCGGAACCAGTTAGGAGACAAGTCAAACGTGAAGACAGAGAAGG
GAACAATAACATTTCTTATATCGACTTCTCAATGCCTCCCGTTCACTTTCTTGTGTGAAACCAGAACCAACATTGCCTGTCATGGA
TTGGGATGCATCTGACAGCAACAACAACAACAACAACAACAACATGGTTAAAGGGGAGCTAACGTTTGACTACCAAGACATGGAAT
TCGAACCCCAAACCTATTTCTCGTTGACCGAGTTGCTTACAGCAGATGATAGTGACCTGTGCAATGGATATGGCTATAACGAGGAT
GTTTCAAGAAACACGGATAACCCAAACCCTCAGGTTGAGACAATGGAACAGTGGAGAGCGTTTCTCAGTGACAATACAAAGCCATT
TCAGATATGTATGCATGTGGAACCAGAGGCTGATCTCACTTGCCAGACTTGTAATATCACAATACATTCCCACTGCTCTCCATGGG
AGGAGGAATCTACTTGCACCAGAAGTAACTGGAGATGCGGTCCCTGCCGTGAGTGGATGTAGCAGCGTTCCCTAATTTGAAGTTAC
CACTTAATTTGTACTTTTGTTTGCTTCTAGAAATATTTGGTGAATACTAGGAACATGTGTAATTGAGAAGAAGTAAATTAAAGTCC
ATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872016 PHD finger family protein [Arabidopsis lyrata subsp. lyrata] | 581 | 5e-058 |
| BAB11682 unnamed protein product [Arabidopsis thaliana] | 569 | 1e-056 |
| NP_197668 PHD finger family protein [Arabidopsis thaliana] | 569 | 1e-056 |
| XP_002875697 hypothetical protein ARALYDRAFT_905616 [Arabidopsis lyrata subsp. lyrata] | 306 | 4e-026 |
| BAA98208 unnamed protein product [Arabidopsis thaliana] | 284 | 1e-023 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FNI5 Gb|AAC80581.1 | 569 | 9e-057 |
| Q56XE1 Putative uncharacterized protein At5g35210 | 284 | 1e-023 |
| Q9LHR7 Genomic DNA, chromosome 5, TAC clone:K3D20 | 284 | 1e-023 |
| Q3E8P3 Putative uncharacterized protein At5g35210.1 | 279 | 4e-023 |
| B9HQK7 Predicted protein | 247 | 2e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22760.1 PHD finger family protein | 570 | 4e-059 |
| AT5G35210.2 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 296 | 3e-027 |
| AT5G35210.1 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 279 | 2e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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