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Information for unigene UN72927

FASTA Sequence
Unigene ID: UN72927Length: 780 SSR 
GGGACAACCACAACCACCACCACATCAGGGTTAGGTTTATTTATCCTATTATTTCTCTCTCCCTTGTCTCCGATTCCGATCTGTTC
TTTTTCTCCCCGATCCGCTCTTCAGACACAAAAAGGGTTTCTAATTCGGATCTGTACTTTCGTCCATGGATACTCGTAAGAGAGGA
CGGCCTGAAGCTGCTGGTTCGTTCAACTCCAATGGCGGCGGCGGAGGATTCAAGAAGTCTAAGCAAGAGATGGAATCATATTCAAC
TGGTTTAGGAAGCAAATCCAAGCCTTGCACTAAATTTTTCAGCACTTCTGGCTGTCCTTTTGGAGATAACTGCCACTTCTTGCACT
ATGTTCCCGGAGGATATAATGCTGTAGCACAGCTGACAAACATGGCGCCCATGCTTCCTCAAGCTTCCAGAAACATGCAAGGATCT
GGTGGTGTTGGAGGAGGAGGGAGATTCTCAGGGAGAGGAGGAGGAGAGTCTGGTCCTGGACACGCGTCTAGCTTTGGTGCCTCAGC
CACTGCGAAGATCAGCGTGGATGCTTCGCTTGCCGGCGCCATCATTGGTAAAGGAGGAGTCAGTTCGAAACAGATATGTCGTCAGA
CAGGTGCGAAGCTGTCGATTCAAGACCACGAGAGAGACCCTAACCTGAAGAACATTGAGCTCGAAGGGACGTTTGAGCAGATAAAC
GGAGCTAGCGCGATGGTTAGGGAGCTGATCGGGAGCTTAACTCTGCAGCTAGTAGAGACACTGGTGGTGGTGGTGGTGGACTGGGA
GGGGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884884 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]8406e-088
BAJ34617 unnamed protein product [Thellungiella halophila]8381e-087
NP_566412 zinc finger CCCH domain-containing protein 36 [Arabidopsis thaliana]7976e-083
XP_002873278 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]7681e-079
NP_196295 zinc finger CCCH domain-containing protein 52 [Arabidopsis thaliana]7483e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7C3 Zinc finger CCCH domain-containing protein 367973e-084
Q9FG30 Zinc finger CCCH domain-containing protein 527597e-080
Q7XPK1 Zinc finger CCCH domain-containing protein 312973e-026
Q7F8R0 Zinc finger CCCH domain-containing protein 142955e-026
Q69XQ3 Zinc finger CCCH domain-containing protein 442767e-024

TrEMBL top hits (Blast detail)Scoree value
A9P281 Putative uncharacterized protein3655e-033
B9T5D8 Putative uncharacterized protein3432e-030
B9GYL2 Predicted protein3413e-030
C6TAD1 Putative uncharacterized protein3342e-029
B9T5D9 Putative uncharacterized protein3333e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein7973e-085
AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein7597e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members