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Information for unigene UN72943

FASTA Sequence
Unigene ID: UN72943Length: 816 SSR 
GAGCCAAGAGCAGCAAGAGCAGCGAGAGCAGCAGCAGCAGCTTGTTGGATAAACAGAAACAGAAGACATGTCTTCGCAGAGGGATG
ACTACTCGTTGGAACACCGATAGGATTGATAATGCGGAGCTGGCGTTATTCGAGATACTCAAGGAGAAAGGCGCTTCCTTTGAGAG
GCCTGTTCCGCGGGCAGAGCTGCGAGTTTCGGCTCGTAGGAGGATCGGGGATACTGGGCTGTTGGACCATTTGTTGAAGCACATTG
ACGGGAATGTGACCCCAGGTGGCGCGGAGAGGTTTAGGAGGTGTCATAACACCGAAGGGACGATGCAGTATTGGCTAGAGAGTGCT
GATTTGATCAAGATCAAGCTTGAGTCTGGGGTATGTGATTCTAATTGGGCTCCCCCTTCTTGGTGGAAGCTTCAGGGTGCGAACAG
CATTATTAAACTTGAACCTGGGGTTCTTGAACCATCTGAGTCCCCTGCTAAACTTAAGGAAGAGATGGATAAGATGAGGAGTGAGA
TCAAAGAACTTGTATCTGATTTGGCACTAATTAAACGTGAATCTGGAATTCGTGATCTGGACTCGATTCCTCTAGCTCAGTGGAAG
ATTCAGAGTTCATCAAAAGAATCACCTGCTGTCTCCTCAAAGCTTAGGGAAGAAATTGATAAAATGAAGAGTGATTTAAAAAACAT
ATATCCAAGCCAGAATTACCAAATAATGCTGATGCAATGAGAATTAATCAAGATTTATGAGTTGGAGAGTAAAGACTGATAAGCAA
ATTGCGGATATCTCAATTCTTTGGCATCACACAGTGCATGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874141 hypothetical protein ARALYDRAFT_489223 [Arabidopsis lyrata subsp. lyrata]4813e-046
BAA97239 unnamed protein product [Arabidopsis thaliana]4761e-045
NP_197751 uncharacterized protein [Arabidopsis thaliana]4761e-045
NP_001031931 uncharacterized protein [Arabidopsis thaliana]4761e-045
XP_002325728 predicted protein [Populus trichocarpa]4293e-040

Swiss-Prot top hits (Blast detail)Scoree value
Q9FGN8 Protein DYAD3422e-031

TrEMBL top hits (Blast detail)Scoree value
Q9LT03 Gb|AAD12714.14768e-046
B9IP29 Predicted protein4292e-040
Q5EAG3 At5g236104141e-038
Q6DBN8 At5g236104141e-038
B9N597 Predicted protein4078e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G23610.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWI1 (SWITCH1); phospholipase C (TAIR:AT5G51330.1); Has 107 Blast hits to 101 proteins in 23 species: Archae - 3; Bacteria - 6; Metazoa - 1; Fungi - 4; Plants - 61; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).4765e-048
AT5G23610.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWI1 (SWITCH1); phospholipase C (TAIR:AT5G51330.1); Has 113 Blast hits to 109 proteins in 23 species: Archae - 3; Bacteria - 8; Metazoa - 4; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).4765e-048
AT5G51330.1 SWI1 (SWITCH1); phospholipase C3422e-032
AT2G01810.1 PHD finger family protein1191e-006
AT1G66170.1 MMD1 (MALE MEIOCYTE DEATH 1); DNA binding / protein binding / zinc ion binding1136e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members