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Information for unigene UN72945

FASTA Sequence
Unigene ID: UN72945Length: 827 SSR 
GTCACACGAGGAGCTCGATTTGGAGATGAACAACAACAACAACAACAACCGCCAATCTCTCATCCTCTCCGGTCCTCCCGACATCA
ACCTACCTCTCTCCGCCGAGCGAAGCCCTCCTCCTCAGCCGTGGAACCTCGATTCCTGCGACATTCTCGATGTCGGGTTAGGCTCT
CAAGCTTACGAAACCGAGAATTACATGAGCGTTGTCCCCAAAGTCGGTCGGAAATGCGCCAAGCGTGTGGACAGCGTCTGGGGAGC
TTGGGTCTTCTTCAGTTTCTACTTCAAGCCCGCTCTGAACGACAAGTCGAAGGCCAAGATCGTACGCGACAGCAACGGGCTGTCTG
GTTTCGATAAATCCGATCTGAAGCTCGATGTGTTTTTGGTCCAGCACGATATGGAGAACATGTACATGTGGGTGTTCAAGGAGAGG
CCTGAGGACGCTCTCGGGAAGATGCAGTTGAGAAGCTACATGAACGGGCACTCGAGGCAAGGGGATCGTTTGTTTCCGTTTAGCGT
TGAGAAAGGGTTCGTTAGGTCTCATAGGATGCAGAGGAAGCATTACAGAGGGCTTTCGAATCCTCAGTGTGTTCATGGGATCGAGC
TTGTTCCTTCTCCGAACCTCGCTTGTCTCGACGAGGAAGAGAGGAAGAGGTGGATGGAGCTGACCGGGAGGGACTTGAACTTCGCG
ATCCCTCCTGAAGCTAGCGACTTTGGCTCCTGGAGGACCTTCCCAACACTGACTTTGAGCTCGAGAGGCATCCTCCACCGCCTGCT
ACGTTGAAGACACACTCTAAGAAGCTGCTTATGGCTCTGGACTCATCTCTCGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881516 sodium-and lithium-tolerant 1 [Arabidopsis lyrata subsp. lyrata]12279e-133
BAJ34598 unnamed protein product [Thellungiella halophila]12198e-132
NP_565864 protein sodium-and lithium-tolerant 1 [Arabidopsis thaliana]12162e-131
XP_002263786 PREDICTED: hypothetical protein [Vitis vinifera]10853e-116
XP_002527735 conserved hypothetical protein [Ricinus communis]10835e-116

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O80926 Expressed protein12161e-131
B9SP16 Putative uncharacterized protein10833e-116
Q9FQY3 SLT1 protein10564e-113
B9SR12 Putative uncharacterized protein9921e-105
B9HMG3 Predicted protein9874e-105

Arabidopsis top hits (Blast detail)Scoree value
AT2G37570.1 SLT1 (sodium- and lithium-tolerant 1)12167e-134
AT5G02480.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: SLT1 (sodium- and lithium-tolerant 1) (TAIR:AT2G37570.1); Has 60 Blast hits to 60 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9595e-104
AT3G12570.1 FYD9344e-101
AT3G12570.3 FYD9344e-101
AT3G12570.2 FYD9344e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members