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Information for unigene UN72960

FASTA Sequence
Unigene ID: UN72960Length: 375 SSR 
AGGAAGCTGCACATTGACAGCATCTTCATCCTTCTTCTCATCATCATCTACCTCTGTCTCCTTTTCGGATTCAGGATCTTCTTCAT
CACCATCGTTCAAGAGATCAAACGGATTAATCGAAAAACGGCCTCTCGAGCCACCGAGCTGCTGCTCTTCGTCTTCTTCTTCTTCT
TCTTCTTCCTCTTCTTCAGCGTGATGATCCTGTTGTTTAGATTCTTCATGTTCCTTGAGGACCTTCTTCAACAACCTCCCAGACAT
GTCTTCTCCTCCTGCTTCCTCGTCGTCTCGAAACCCCGACAAAGTCGATTTTAAGACGGCGACTAGAGTTGATATGCTTAAACTCA
GCGGGTGATCCCGCCTGACCTGGGGTCGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880272 hypothetical protein ARALYDRAFT_483858 [Arabidopsis lyrata subsp. lyrata]2504e-020
NP_566090 uncharacterized protein [Arabidopsis thaliana]2182e-016
BAF00624 hypothetical protein [Arabidopsis thaliana]2182e-016
XP_001384572 EBNA1-binding protein homolog [Scheffersomyces stipitis CBS 6054]1492e-008
AAY29121 cement precursor protein 3B variant 2 [Phragmatopoma californica]1421e-007

Swiss-Prot top hits (Blast detail)Scoree value
A7TJM9 ATP-dependent RNA helicase DRS11391e-008
O94317 Uncharacterized serine-rich protein C215.131326e-008
O42970 Uncharacterized serine-rich protein C1E8.051282e-007
Q75JC9 Uncharacterized protein DDB_G02716701272e-007

TrEMBL top hits (Blast detail)Scoree value
O80734 Expressed protein2181e-016
Q0WQH5 Putative uncharacterized protein At2g46900 (Fragment)2181e-016
A3LU93 EBNA1-binding protein homolog1491e-008
Q3MJK8 Cement protein 3B variant 21428e-008
C5M6X4 Putative uncharacterized protein1392e-007

Arabidopsis top hits (Blast detail)Scoree value
AT2G46900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 3014 Blast hits to 2357 proteins in 239 species: Archae - 2; Bacteria - 96; Metazoa - 1166; Fungi - 321; Plants - 100; Viruses - 47; Other Eukaryotes - 1282 (source: NCBI BLink).2188e-019
AT5G03710.1 unknown protein1183e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members