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Information for unigene UN73019
| FASTA Sequence |
| Unigene ID: UN73019 | Length: 758 |
SSR | | GGAACATCCAACACACACCTCTCATTCACATCTTTCTTCTTTGTAGTAAACAGAAAGGGAGAGAGAGAGAACGGAGAATACAATGG
CGTCGAACTCGCTCATGAGCTGCGGCATCGCCGCCGTCTACCCTTCCCTTCTTTCTTCTTCAAAGTCTAAATTCGCCTCCTCCGGA
TTTGCCCTTCCCAACGCCGGGAACGTTTGCCGTATCAGAATGGCTGCTCACTGGATGCCCGGCGAGCCGCGTCCTGCTTACCTCGA
CGGTTCTGCTCCTGGTGACTTTGGGTTTGACCCTCTTGGACTTGGAGAGGTTCCAGAGAATCTTGAGAGATACAAAGAATCAGAGC
TCATCCACTGTAGATGGGCTATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCTTTGGGATACGGAAACTGGGTCAAGGCTCAA
GAGTGGGCAGCAGTACCTGGAGGACAAGCCACTTACTTGGGCAACCCGGTCCCATGGTGTACTCTGCCCACAATCTTGGCTATAGA
GTTCTTAGCTATTGCCTTTGTTGAGCACCAGAGGAACATGGAGAAAGACCCTGAGAAAAAGAAATACCCTGGAGGTGCATTTGACC
CTCTTGGATACTCCAAAGACCCCAAGAAGTTTGAGGAGTTGAAAGTTAAGGAGATCAAGAACGGGAGGCTTGCGTTGTTGGCCTTT
GTAGGCTTCTGTGTGCAGCAATCGGCTTACCAGGGACAGGACATTGGAGAACTTGGCTACTCACTTGGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33962 unnamed protein product [Thellungiella halophila] | 1090 | 6e-117 |
| XP_002878004 hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp. lyrata] | 1087 | 1e-116 |
| NP_191049 light-harvesting complex I chlorophyll a/b binding protein 1 [Arabidopsis thaliana] | 1078 | 1e-115 |
| AAG40043 AT3g54890 [Arabidopsis thaliana] | 1068 | 2e-114 |
| NP_001078288 light-harvesting complex I chlorophyll a/b binding protein 1 [Arabidopsis thaliana] | 990 | 2e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P12360 Chlorophyll a-b binding protein 6A, chloroplastic | 938 | 1e-100 |
| Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic | 826 | 1e-087 |
| P14278 Chlorophyll a-b binding protein 4, chloroplastic | 319 | 7e-029 |
| Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic | 319 | 7e-029 |
| P12062 Chlorophyll a-b binding protein 37, chloroplastic | 318 | 9e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q01667 AT3g54890 | 1078 | 1e-115 |
| Q9C5R7 AT3g54890 | 1068 | 1e-114 |
| A8MS75 Uncharacterized protein At3g54890.4 | 990 | 2e-105 |
| B9HLM2 Light-harvesting complex I protein Lhca1 | 967 | 8e-103 |
| Q40512 Photosystem I light-harvesting chlorophyll a/b-binding protein | 962 | 3e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54890.1 LHCA1; chlorophyll binding | 1078 | 6e-118 |
| AT3G54890.4 LHCA1; chlorophyll binding | 990 | 1e-107 |
| AT3G54890.2 LHCA1; chlorophyll binding | 760 | 5e-081 |
| AT3G54890.3 LHCA1; chlorophyll binding | 746 | 2e-079 |
| AT4G10340.1 LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding | 319 | 7e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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