RadishBase

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Information for unigene UN73230

FASTA Sequence

Unigene ID: UN73230	Length: 519	SSR
CACGAAAAGTGATTTAACATTGCGTTTCCAGATATCAAATACCTAATCACGAACTGTTACACCCAAAACAGCAGAAGGACCAAACA TCACAACACATAGAGAGAAACCATAAACCCGAACCAAAAACGGAACAGTCATTAAACAACCACAAACCTAAACTAATTACCAACCA CCACCACCGCTTCCTCCTCCGTAACCTCCACCTTCACCACCATCACGTCTGCCACCTCCACCGTAGCCTCCACCACCACCTCCTCT CGAGGAGTAACCACCACCTCCTCCACCACTGTACCCACCCTCGCGTCTTCCACCACCGTATCCACCACCGCCTCCTCCGTAACCAC CACCACCACCTCCGCTGCGGTATCCACCACCGCCACCTCCACGGCCTCCTCCGCCGCCACCGCTACCACGAAACTGAGCCTCGTTC ACAGTGATGCTGCGACCGTCGAGATCCTGCCCGTTCATCGCTTCGATGGCATCTCTCATTGACTTCTCGTCCTTGAAAGTGACGAA TCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
P49311 RecName: Full=Glycine-rich RNA-binding protein GRP2A	542	8e-054
ACJ04160 putative glycine-rich RNA-binding protein [Chorispora bungeana]	538	2e-053
NP_179760 glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]	513	2e-050
AAM62447 glycine-rich RNA binding protein 7 [Arabidopsis thaliana]	508	7e-050
AAK68766 glycine-rich RNA binding protein [Arabidopsis thaliana]	464	9e-045

Swiss-Prot top hits (Blast detail)	Score	e value
P49310 Glycine-rich RNA-binding protein GRP1A	579	2e-059
P49311 Glycine-rich RNA-binding protein GRP2A	542	5e-055
Q03250 Glycine-rich RNA-binding protein 7	513	1e-051
Q03251 Glycine-rich RNA-binding protein 8	460	2e-045
Q05966 Glycine-rich RNA-binding protein 10	451	2e-044

TrEMBL top hits (Blast detail)	Score	e value
B6VA25 Putative glycine-rich RNA-binding protein	538	2e-053
C0Z304 AT2G21660 protein	464	7e-045
B9DFJ8 AT4G39260 protein	460	2e-044
Q2VCI6 Putative glycine-rich RNA binding protein-like	448	5e-043
D2D310 Glycine-rich RNA-binding protein	432	3e-041

Arabidopsis top hits (Blast detail)	Score	e value
AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding	514	9e-053
AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding	461	1e-046
AT2G21660.2 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding	384	1e-037
AT4G39260.2 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding	337	3e-032
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding	315	1e-029

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	1			100%

Unigene Members