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Information for unigene UN73450
| FASTA Sequence |
| Unigene ID: UN73450 | Length: 731 |
SSR | | GCAGTGTCACAACCGGTACTTTACAGTTCTTGGAGAAGATGGAGAAAAGCGTGAATTTTCTGTTTGGTGGAACAAACTTCAACAGG
AAGAAGTTTGCTCCAGATTTCGCCAAGTTTAAGAATCGTAAGGCCGAGGATGATGATGATGATCAAAACAAGAAACTGAGCTTCTT
TGAGCAACAAGAAGAAGAGGAACCTGAGCAGGAGCAGAGAGTCTCCTCCTCTAAGAAGAGGAAGCGAAAGTCTGCTAATTCTGAGC
CTGTTGAAGGATTTGATGTGTTCAAGAGCTCAAAGAAGTCACGTTCCAAAGGGAAAGAAGTTGAACAAGAGACAAAGGATGAGACT
TTAGAAAATCCGAAGAAGGAGCTTTACCGGCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAACATTCATGTTTCTGGTAA
CAACATTCCATCTCCCCTTAAAAGCTTCACAGAGTTGTCAACGAGGTATGGTTGTAAGAAATACATATTACGCAATTTGGCTGAAC
TTGGATTTAAAGAGCCTACCCCAATCCAAAGGCAGGCTATCCCAGTTCTCCTATCGGGTCGTGAATGTTTCGCCTGTGCTCCAACT
GGGTCAGGAAAAACCTTTGCTTTTATTTGCCCCATGCTTATTAAACTCAAGCGCCATTCAACCGATGGTATTAGAGCAGTTATCCT
CTCTCCTGCACGAGAACTAGCTGCTCAAACAGCTAGAGAAGGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187583 DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana] | 955 | 3e-101 |
| AAF23311 putative RNA helicase [Arabidopsis thaliana] | 924 | 1e-097 |
| XP_002884750 hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp. lyrata] | 901 | 5e-095 |
| XP_002520902 dead box ATP-dependent RNA helicase, putative [Ricinus communis] | 671 | 2e-068 |
| XP_002279705 PREDICTED: hypothetical protein [Vitis vinifera] | 627 | 3e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84TG1 DEAD-box ATP-dependent RNA helicase 57 | 955 | 1e-102 |
| Q5K5B6 DEAD-box ATP-dependent RNA helicase 57 | 552 | 6e-056 |
| Q9Y2R4 Probable ATP-dependent RNA helicase DDX52 | 341 | 2e-031 |
| Q86IZ9 Probable ATP-dependent RNA helicase ddx52 | 337 | 5e-031 |
| Q99PT0 Probable ATP-dependent RNA helicase DDX52 | 337 | 5e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S4I3 Dead box ATP-dependent RNA helicase, putative | 671 | 2e-068 |
| B9N1Q7 Predicted protein | 617 | 3e-062 |
| A5BS93 Putative uncharacterized protein | 595 | 1e-059 |
| A2YPC3 Putative uncharacterized protein | 552 | 1e-054 |
| C5X431 Putative uncharacterized protein Sb02g041390 | 476 | 6e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09720.1 DEAD/DEAH box helicase, putative | 960 | 3e-104 |
| AT3G09620.1 DEAD/DEAH box helicase, putative | 207 | 6e-017 |
| AT1G20920.1 DEAD box RNA helicase, putative | 206 | 8e-017 |
| AT1G20920.2 DEAD box RNA helicase, putative | 206 | 8e-017 |
| AT5G63120.2 ethylene-responsive DEAD box RNA helicase, putative (RH30) | 200 | 4e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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