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Information for unigene UN73484
| FASTA Sequence |
| Unigene ID: UN73484 | Length: 687 |
SSR | | GGATCCGAAACAGAGTGAGAGAGAGAGAGAGGAGTGAGAGGGGAAGAAGACGATGGCGTCAATGTCTCTCACGTTTTCTTCTTCGC
TATGTTCATCTCGAATCCCCGGAGAAAAACGCAGATTCCACCAGAGAGAAACAACCCTCGTGCGATGCGTTCTCGCCGCTTCTAAA
TCATCTCCTGGAGGCGCCGCCACGAAGAAGAGGCTCTGGAAGGAAGGAGAGTTTCCCGGAATCACGGAGCCTGCTAACACTAGAAG
AGCCCCGATGAAGAACGTGAAGAAGAAGCTCGACAGGAGGAGCAAAGCCAACGGGTGGGTTAACACCGTAACCGAGACCTTATTCG
ATCTCATCGCCAAAAAGCAGTGGCTAAAAGCTCTCGAGGTGTTTGAGATGTTGAGGGAGCAGCCCTTTTATCAACCAAAGGAAGGG
ACTTACATGAAGCTTCTCGTTCTTTTGGGGAAATCTGGACAGCCTAATCGTGCACAGAAGGTGTTCGACGAAATGCTTGAAGAAGG
ACTTGAACCAACTGCTGAGCTCTACACTGCTCTACTCGGTGCTTATTGTAGGAGTAATCTTATAGACGAGGCTTTCTCAGTTCTTG
AACGGATGAAAAGCTTGCCTCAGTGTCAACCTGATGTTTACACTTACAGCACTCTGCTCAAAGTCTGTGTGGACGCGTCTCTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187294 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 914 | 1e-096 |
| XP_002884579 EMB2750 [Arabidopsis lyrata subsp. lyrata] | 908 | 6e-096 |
| XP_002519315 pentatricopeptide repeat-containing protein, putative [Ricinus communis] | 716 | 1e-073 |
| CAN74604 hypothetical protein VITISV_025315 [Vitis vinifera] | 676 | 5e-069 |
| XP_002274904 PREDICTED: hypothetical protein [Vitis vinifera] | 676 | 5e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQU6 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic | 919 | 2e-098 |
| Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic | 311 | 5e-028 |
| Q9SV96 Pentatricopeptide repeat-containing protein At4g39620, chloroplastic | 208 | 4e-016 |
| Q9S7Q2 Pentatricopeptide repeat-containing protein At1g74850, chloroplastic | 174 | 4e-012 |
| Q9LW84 Pentatricopeptide repeat-containing protein At3g16010 | 155 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RZZ6 Pentatricopeptide repeat-containing protein, putative | 716 | 8e-074 |
| A5BHU7 Putative uncharacterized protein | 676 | 3e-069 |
| B9HXH4 Predicted protein (Fragment) | 658 | 4e-067 |
| B6SYZ5 PPR2 | 568 | 1e-056 |
| Q7Y1W6 PPR2 | 567 | 2e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06430.1 EMB2750 (embryo defective 2750) | 919 | 2e-099 |
| AT5G48730.1 pentatricopeptide (PPR) repeat-containing protein | 311 | 5e-029 |
| AT4G39620.1 EMB2453 (embryo defective 2453) | 208 | 4e-017 |
| AT1G74850.1 PTAC2 (PLASTID TRANSCRIPTIONALLY ACTIVE2) | 174 | 4e-013 |
| AT3G16010.1 pentatricopeptide (PPR) repeat-containing protein | 155 | 6e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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