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Information for unigene UN73497
FASTA Sequence |
Unigene ID: UN73497 | Length: 489 |
SSR | | CCTGAAGAACCTGACTGTCAATACTTTATGAGAACCGGAGACTGTAAATTTGGAGCCTCTTGCAGATTCCATCATCCTCTTGCAGC
AGCTTCTCCAAAGAGAGTTACTCTCAGCAATATCGGCCTCCCACTTCGTCCTGGCACGGCGCCATGCAGCCACTTTGAGCAGCATG
GCATCTGTAAGTTTGGGCCTGACTGCAAATTTGACCACTCCATGGGCTCTTCTTCGCTAAGCTACAGCATGTCAGCTTCTTCGCTC
ACTGACATGCCCGTTGCGCCTTACCCTCTCGGATCCTCAACGCTAGCTCCTTCATCATCATCATCATCCACGTCTGACCAACGCAC
AGAACTACACTCTTCGAGCTCCGTTAAACCAAAAACACAACTAGTGGTGGCTCGGAACTGTGTCTGCTGGAGTTCTACTTCTATGA
CTGGCGGCGTGAGTCAGTCCGAGCCTCCTGCTGAGACGAACTGATGACTCAGCTAGTGT
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GenBank top hits (Blast detail) | Score | e value |
XP_002871822 hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp. lyrata] | 585 | 4e-059 |
NP_197356 zinc finger CCCH domain-containing protein 58 [Arabidopsis thaliana] | 549 | 7e-055 |
CAN78551 hypothetical protein VITISV_003243 [Vitis vinifera] | 405 | 3e-038 |
XP_002276435 PREDICTED: hypothetical protein [Vitis vinifera] | 405 | 3e-038 |
XP_002516892 nucleic acid binding protein, putative [Ricinus communis] | 398 | 2e-037 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q6NPN3 Zinc finger CCCH domain-containing protein 58 | 549 | 6e-056 |
Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 455 | 5e-045 |
Q5NAV3 Zinc finger CCCH domain-containing protein 5 | 367 | 8e-035 |
Q5NAW2 Zinc finger CCCH domain-containing protein 6 | 343 | 5e-032 |
Q84W91 Zinc finger CCCH domain-containing protein 32 | 337 | 2e-031 |
TrEMBL top hits (Blast detail) | Score | e value |
A5B1K6 Putative uncharacterized protein | 405 | 2e-038 |
B9RT23 Nucleic acid binding protein, putative | 398 | 1e-037 |
B9HSD6 Predicted protein | 390 | 1e-036 |
B9EV16 Putative uncharacterized protein | 367 | 6e-034 |
B9N500 Predicted protein | 366 | 7e-034 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G18550.1 nucleic acid binding / zinc ion binding | 549 | 7e-057 |
AT3G06410.1 nucleic acid binding / zinc ion binding | 455 | 5e-046 |
AT2G47850.1 zinc finger (CCCH-type) family protein | 337 | 3e-032 |
AT2G47850.2 zinc finger (CCCH-type) family protein | 337 | 3e-032 |
AT2G47850.3 zinc finger (CCCH-type) family protein | 337 | 3e-032 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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