Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN73497

FASTA Sequence
Unigene ID: UN73497Length: 489 SSR 
CCTGAAGAACCTGACTGTCAATACTTTATGAGAACCGGAGACTGTAAATTTGGAGCCTCTTGCAGATTCCATCATCCTCTTGCAGC
AGCTTCTCCAAAGAGAGTTACTCTCAGCAATATCGGCCTCCCACTTCGTCCTGGCACGGCGCCATGCAGCCACTTTGAGCAGCATG
GCATCTGTAAGTTTGGGCCTGACTGCAAATTTGACCACTCCATGGGCTCTTCTTCGCTAAGCTACAGCATGTCAGCTTCTTCGCTC
ACTGACATGCCCGTTGCGCCTTACCCTCTCGGATCCTCAACGCTAGCTCCTTCATCATCATCATCATCCACGTCTGACCAACGCAC
AGAACTACACTCTTCGAGCTCCGTTAAACCAAAAACACAACTAGTGGTGGCTCGGAACTGTGTCTGCTGGAGTTCTACTTCTATGA
CTGGCGGCGTGAGTCAGTCCGAGCCTCCTGCTGAGACGAACTGATGACTCAGCTAGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871822 hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp. lyrata]5854e-059
NP_197356 zinc finger CCCH domain-containing protein 58 [Arabidopsis thaliana]5497e-055
CAN78551 hypothetical protein VITISV_003243 [Vitis vinifera]4053e-038
XP_002276435 PREDICTED: hypothetical protein [Vitis vinifera]4053e-038
XP_002516892 nucleic acid binding protein, putative [Ricinus communis]3982e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q6NPN3 Zinc finger CCCH domain-containing protein 585496e-056
Q9SQU4 Zinc finger CCCH domain-containing protein 344555e-045
Q5NAV3 Zinc finger CCCH domain-containing protein 53678e-035
Q5NAW2 Zinc finger CCCH domain-containing protein 63435e-032
Q84W91 Zinc finger CCCH domain-containing protein 323372e-031

TrEMBL top hits (Blast detail)Scoree value
A5B1K6 Putative uncharacterized protein4052e-038
B9RT23 Nucleic acid binding protein, putative3981e-037
B9HSD6 Predicted protein3901e-036
B9EV16 Putative uncharacterized protein3676e-034
B9N500 Predicted protein3667e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G18550.1 nucleic acid binding / zinc ion binding5497e-057
AT3G06410.1 nucleic acid binding / zinc ion binding4555e-046
AT2G47850.1 zinc finger (CCCH-type) family protein3373e-032
AT2G47850.2 zinc finger (CCCH-type) family protein3373e-032
AT2G47850.3 zinc finger (CCCH-type) family protein3373e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members